Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNORD115-21-201ENST00000362963 81 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-14-201ENST00000363090 81 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-13-201ENST00000363358 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-41-201ENST00000363608 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-11-201ENST00000363616 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-5-201ENST00000363633 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-39-201ENST00000363694 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-4-201ENST00000363810 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-16-201ENST00000363887 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-6-201ENST00000363942 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-42-201ENST00000364273 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-15-201ENST00000364809 81 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-1-201ENST00000364961 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-26-201ENST00000365067 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-10-201ENST00000365073 81 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-43-201ENST00000365503 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 Y_RNA.370-201ENST00000365589 108 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-36-201ENST00000365629 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD18B-201ENST00000365659 72 ntBASIC1.53□□□□□ -2.16
SOX2P48431 Y_RNA.568-201ENST00000384742 113 ntBASIC1.53□□□□□ -2.16
SOX2P48431 AL627390.1-201ENST00000396055 340 ntBASIC1.53□□□□□ -2.16
SOX2P48431 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.53□□□□□ -2.16
SOX2P48431 AC008834.1-201ENST00000511612 175 ntBASIC1.53□□□□□ -2.16
SOX2P48431 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.53□□□□□ -2.16
SOX2P48431 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SOX2P48431 MIR4524B-201ENST00000581569 115 ntBASIC1.53□□□□□ -2.16
SOX2P48431 AL513534.2-201ENST00000603836 250 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-40-201ENST00000606510 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.53□□□□□ -2.16
SOX2P48431 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.17
SOX2P48431 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.52□□□□□ -2.17
SOX2P48431 RNA5SP432-201ENST00000362480 116 ntBASIC1.52□□□□□ -2.17
SOX2P48431 RNY1P11-201ENST00000363759 113 ntBASIC1.52□□□□□ -2.17
SOX2P48431 RNU6-704P-201ENST00000364162 103 ntBASIC1.52□□□□□ -2.17
SOX2P48431 SNORD1A-201ENST00000364968 72 ntBASIC1.52□□□□□ -2.17
SOX2P48431 Y_RNA.420-201ENST00000384043 110 ntBASIC1.52□□□□□ -2.17
SOX2P48431 Y_RNA.440-201ENST00000384120 114 ntBASIC1.52□□□□□ -2.17
SOX2P48431 SNORA27-201ENST00000384323 126 ntBASIC1.52□□□□□ -2.17
SOX2P48431 RNU6-1067P-201ENST00000384752 107 ntBASIC1.52□□□□□ -2.17
SOX2P48431 RNU6-460P-201ENST00000391158 108 ntBASIC1.52□□□□□ -2.17
SOX2P48431 AC019129.1-201ENST00000403786 261 ntBASIC1.52□□□□□ -2.17
SOX2P48431 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.52□□□□□ -2.17
SOX2P48431 AC079140.2-201ENST00000506193 142 ntBASIC1.52□□□□□ -2.17
SOX2P48431 RNU6-922P-201ENST00000516753 99 ntBASIC1.52□□□□□ -2.17
SOX2P48431 RNU6-1149P-201ENST00000516810 97 ntBASIC1.52□□□□□ -2.17
SOX2P48431 AC090821.2-201ENST00000523552 176 ntBASIC1.52□□□□□ -2.17
SOX2P48431 MIR4285-201ENST00000581001 85 ntBASIC1.52□□□□□ -2.17
SOX2P48431 MIR548AR-201ENST00000582191 57 ntBASIC1.52□□□□□ -2.17
SOX2P48431 AP001485.1-201ENST00000604799 199 ntBASIC1.52□□□□□ -2.17
SOX2P48431 MIR376A2-201ENST00000636782 80 ntBASIC1.52□□□□□ -2.17
SOX2P48431 AC010332.2-201ENST00000613083 1904 ntBASIC1.52□□□□□ -2.17
SOX2P48431 MTND5P32-201ENST00000560711 1802 ntBASIC1.52□□□□□ -2.17
SOX2P48431 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.51□□□□□ -2.17
SOX2P48431 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.51□□□□□ -2.17
SOX2P48431 MIR302D-201ENST00000362275 68 ntBASIC1.51□□□□□ -2.17
SOX2P48431 Y_RNA.120-201ENST00000363304 110 ntBASIC1.51□□□□□ -2.17
SOX2P48431 RNU4-61P-201ENST00000411243 107 ntBASIC1.51□□□□□ -2.17
SOX2P48431 SNX2P2-201ENST00000424553 323 ntBASIC1.51□□□□□ -2.17
SOX2P48431 MTATP6P21-201ENST00000440681 189 ntBASIC1.51□□□□□ -2.17
SOX2P48431 RPS26P48-201ENST00000491713 339 ntBASIC1.51□□□□□ -2.17
SOX2P48431 RNA5SP272-201ENST00000516095 111 ntBASIC1.51□□□□□ -2.17
SOX2P48431 RNU7-43P-201ENST00000516554 64 ntBASIC1.51□□□□□ -2.17
SOX2P48431 RNU7-70P-201ENST00000516941 66 ntBASIC1.51□□□□□ -2.17
SOX2P48431 AP001328.1-201ENST00000528550 176 ntBASIC1.51□□□□□ -2.17
SOX2P48431 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
SOX2P48431 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
SOX2P48431 RNU6-915P-201ENST00000364943 103 ntBASIC1.5□□□□□ -2.17
SOX2P48431 SNORA70.7-201ENST00000384159 133 ntBASIC1.5□□□□□ -2.17
SOX2P48431 RNU6-1065P-201ENST00000384513 106 ntBASIC1.5□□□□□ -2.17
SOX2P48431 SNORA20-201ENST00000384662 132 ntBASIC1.5□□□□□ -2.17
SOX2P48431 MIR520C-201ENST00000385005 87 ntBASIC1.5□□□□□ -2.17
SOX2P48431 MIR9-3-201ENST00000385084 90 ntBASIC1.5□□□□□ -2.17
SOX2P48431 SNORA40-201ENST00000388090 126 ntBASIC1.5□□□□□ -2.17
SOX2P48431 TMSB4XP3-201ENST00000445144 114 ntBASIC1.5□□□□□ -2.17
SOX2P48431 RNU7-80P-201ENST00000459562 61 ntBASIC1.5□□□□□ -2.17
SOX2P48431 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
SOX2P48431 AL357312.1-201ENST00000603879 298 ntBASIC1.5□□□□□ -2.17
SOX2P48431 AP001340.1-201ENST00000624405 217 ntBASIC1.5□□□□□ -2.17
SOX2P48431 AC091895.1-201ENST00000624494 256 ntBASIC1.5□□□□□ -2.17
SOX2P48431 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
SOX2P48431 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
SOX2P48431 Y_RNA.351-201ENST00000365436 96 ntBASIC1.49□□□□□ -2.17
SOX2P48431 SNORD28B-201ENST00000390993 75 ntBASIC1.49□□□□□ -2.17
SOX2P48431 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.49□□□□□ -2.17
SOX2P48431 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
SOX2P48431 SCARNA15-202ENST00000516881 127 ntBASIC1.49□□□□□ -2.17
SOX2P48431 MIR4648-201ENST00000580107 72 ntBASIC1.49□□□□□ -2.17
SOX2P48431 MIR3937-201ENST00000580135 106 ntBASIC1.49□□□□□ -2.17
SOX2P48431 MIR4764-201ENST00000580680 88 ntBASIC1.49□□□□□ -2.17
SOX2P48431 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.49□□□□□ -2.17
SOX2P48431 GHRLOS.1-201ENST00000610995 70 ntBASIC1.49□□□□□ -2.17
SOX2P48431 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.49□□□□□ -2.17
SOX2P48431 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
SOX2P48431 ZNF355P-201ENST00000427301 3216 ntBASIC1.48□□□□□ -2.17
SOX2P48431 Y_RNA.454-201ENST00000384224 113 ntBASIC1.48□□□□□ -2.17
SOX2P48431 Y_RNA.494-201ENST00000384432 111 ntBASIC1.48□□□□□ -2.17
SOX2P48431 SNORD41-201ENST00000386967 70 ntBASIC1.48□□□□□ -2.17
SOX2P48431 RNU6-257P-201ENST00000410238 98 ntBASIC1.48□□□□□ -2.17
SOX2P48431 RNU7-96P-201ENST00000459535 64 ntBASIC1.48□□□□□ -2.17
SOX2P48431 SNORD111.1-201ENST00000516421 86 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms