Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RNU6-46P-201ENST00000383860 107 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 MIR106A-201ENST00000384870 81 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 RNU6-506P-201ENST00000516553 94 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 RNU6-314P-201ENST00000516574 104 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 MIR4645-201ENST00000583158 77 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 AC005357.1-201ENST00000588399 301 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 AC011921.3-201ENST00000605540 361 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 AC063944.3-201ENST00000609969 533 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 PISRT1.1-201ENST00000616930 107 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 TPTEP1-208ENST00000636884 213 ntBASIC-0.43□□□□□ -2.48
RPL28P46779 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 RNU6-291P-201ENST00000384720 107 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 AC096949.1-201ENST00000412047 152 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.44□□□□□ -2.48
RPL28P46779 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 MIR3925-201ENST00000584674 77 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 AP001282.2-201ENST00000616149 309 ntBASIC-0.44□□□□□ -2.48
RPL28P46779 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.44□□□□□ -2.48
RPL28P46779 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 MIR181A1-201ENST00000385026 110 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 MIR548I3-201ENST00000408378 149 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 AC107399.1-201ENST00000451226 265 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 RNU7-149P-201ENST00000516739 59 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 RNU7-4P-201ENST00000516961 62 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 AC144568.1-201ENST00000520139 137 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 AL662814.1-201ENST00000617364 121 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 MIR6759-201ENST00000638110 65 ntBASIC-0.45□□□□□ -2.48
RPL28P46779 Y_RNA.88-201ENST00000363029 99 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RNU6-403P-201ENST00000363163 104 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 SNORD114-28-201ENST00000363610 72 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 SNORA72.4-201ENST00000384174 132 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 U8.15-201ENST00000390947 134 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 SNORD77.3-201ENST00000391113 65 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RNA5SP300-201ENST00000391197 107 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RNU2-14P-201ENST00000411053 191 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 RPL39P25-201ENST00000449384 154 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 AL021707.8-201ENST00000609428 183 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 SNORA70.25-201ENST00000612741 95 ntBASIC-0.46□□□□□ -2.48
RPL28P46779 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.48
RPL28P46779 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 RNU6-535P-201ENST00000384722 107 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 RNU6-510P-201ENST00000391239 108 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 AC023449.1-201ENST00000454464 154 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 RNU7-96P-201ENST00000459535 64 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 RNU6-120P-201ENST00000516077 103 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 RNU6-911P-201ENST00000516523 104 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 MTND5P34-201ENST00000568888 325 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 MIR4491-201ENST00000581087 68 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 AC006157.1-201ENST00000611750 366 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 AL442067.1-201ENST00000613261 223 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 U6.92-201ENST00000636464 89 ntBASIC-0.47□□□□□ -2.48
RPL28P46779 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 RNA5SP275-201ENST00000363936 118 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 RNU6-801P-201ENST00000364087 105 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 SNORD14C-201ENST00000365382 88 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 SNORA26.6-201ENST00000391256 115 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.48□□□□□ -2.49
RPL28P46779 RNU2-11P-201ENST00000459191 187 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 RNU6-998P-201ENST00000515894 101 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 SNORD36C-201ENST00000516733 66 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 RNU2-31P-201ENST00000516954 155 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 RNU6-897P-201ENST00000517135 105 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 RNU2-60P-201ENST00000517290 128 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 MIR5706-201ENST00000579841 80 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 MIR3145-201ENST00000580727 82 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 MIR4677-201ENST00000584153 80 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 AL133255.1-201ENST00000606374 441 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 AC122108.2-201ENST00000611946 526 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 AL162376.1-201ENST00000624117 175 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 AL669831.3-213ENST00000636676 183 ntBASIC-0.48□□□□□ -2.49
RPL28P46779 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 RNU6-726P-201ENST00000364680 107 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 RNU6-708P-201ENST00000384217 107 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 MIR548A2-201ENST00000384956 97 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 RNU4-30P-201ENST00000410245 143 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 RNA5SP237-201ENST00000410414 113 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 Y_RNA.599-201ENST00000410489 109 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
RPL28P46779 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.49□□□□□ -2.49
RPL28P46779 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.49□□□□□ -2.49
RPL28P46779 RNU7-169P-201ENST00000459456 61 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms