Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SEPT7P4-201ENST00000437076 306 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 RN7SKP88-201ENST00000516847 250 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 MRPS18CP4-201ENST00000535821 231 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 7SK.8-201ENST00000612110 250 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 7SK.11-201ENST00000615477 250 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 7SK.13-201ENST00000622040 250 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
HOXC8P31273 Y_RNA.224-201ENST00000364308 111 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 SNORD114-22-201ENST00000365423 72 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 RNU6-886P-201ENST00000384319 105 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 RNU2-70P-201ENST00000410718 179 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 RNU5E-9P-201ENST00000411164 104 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 AC006461.1-201ENST00000412637 326 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.37□□□□□ -2.19
HOXC8P31273 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 MIR4662B-201ENST00000579498 81 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
HOXC8P31273 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HOXC8P31273 Y_RNA.23-201ENST00000362496 106 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 RNU6-833P-201ENST00000363486 107 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 RNU6-312P-201ENST00000364629 107 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 Y_RNA.634-201ENST00000364811 113 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 Y_RNA.336-201ENST00000365307 109 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 RNU6-209P-201ENST00000384118 107 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 SNORD26-201ENST00000384147 75 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
HOXC8P31273 PCNPP3-201ENST00000393579 471 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 SNORA79-201ENST00000408376 140 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 RNU2-55P-201ENST00000411146 174 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 HMGN2P32-201ENST00000444648 269 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 Y_RNA.666-201ENST00000516187 112 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 SNORA4-201ENST00000584302 138 ntBASIC1.36□□□□□ -2.19
HOXC8P31273 RNU6-268P-201ENST00000364174 107 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 RNU6-643P-201ENST00000384018 107 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 Y_RNA.555-201ENST00000384673 110 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 SNRPGP14-201ENST00000435400 219 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 RNU6-197P-201ENST00000516680 100 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 RNU6-1270P-201ENST00000517128 108 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 AC019288.1-201ENST00000557918 224 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 MIR3664-201ENST00000579074 99 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 MIR4431-201ENST00000579990 94 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 AC104465.1-201ENST00000611365 139 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 MIR6767-201ENST00000637302 66 ntBASIC1.35□□□□□ -2.19
HOXC8P31273 Y_RNA.357-201ENST00000365487 109 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 MIR526A1-201ENST00000384897 85 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 MIR489-201ENST00000384923 84 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 RNU4-43P-201ENST00000410628 137 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 RNU6-365P-201ENST00000517113 106 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 AL513534.2-201ENST00000603836 250 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 AC015726.2-201ENST00000620112 122 ntBASIC1.34□□□□□ -2.19
HOXC8P31273 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
HOXC8P31273 RNU6-199P-201ENST00000362954 107 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 Y_RNA.242-201ENST00000364473 110 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 SNORD61-201ENST00000384252 73 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 SNORA26-201ENST00000391286 122 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 MIR548I3-201ENST00000408378 149 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 MIR548O-201ENST00000408583 114 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 MIR548I1-201ENST00000408810 149 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 AC015922.2-201ENST00000435593 184 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 RNU6-322P-201ENST00000516010 103 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 RNU6-693P-201ENST00000516134 107 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 RNA5SP153-201ENST00000516498 76 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 RNU7-25P-201ENST00000516544 62 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 RNU6-126P-201ENST00000516685 103 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 AC090142.3-201ENST00000519012 385 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 AC006441.5-201ENST00000612680 209 ntBASIC1.33□□□□□ -2.2
HOXC8P31273 Y_RNA.8-201ENST00000362353 102 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 Y_RNA.66-201ENST00000362862 102 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 RNU4-84P-201ENST00000364200 139 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 SNORD38C-201ENST00000384381 69 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 MIR452-201ENST00000385020 85 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 RNU6-1135P-201ENST00000411083 103 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 AC107027.2-201ENST00000512197 115 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 MIR378D2-201ENST00000580636 98 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 FAM106DP-201ENST00000586416 501 ntBASIC1.32□□□□□ -2.2
HOXC8P31273 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.32□□□□□ -2.2
HOXC8P31273 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.31□□□□□ -2.2
HOXC8P31273 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 Y_RNA.180-201ENST00000363867 113 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 Y_RNA.272-201ENST00000364696 102 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 Y_RNA.441-201ENST00000384123 112 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 RNU6-804P-201ENST00000384286 107 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 Y_RNA.521-201ENST00000384560 114 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 RNU6-939P-201ENST00000384634 107 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 MIR548A2-201ENST00000384956 97 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 AC092991.1-201ENST00000477176 376 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 RNU6-917P-201ENST00000516294 104 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 RNU6-504P-201ENST00000516568 104 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 AC097639.2-201ENST00000603159 172 ntBASIC1.31□□□□□ -2.2
HOXC8P31273 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
HOXC8P31273 RNU6-1336P-201ENST00000383886 109 ntBASIC1.3□□□□□ -2.2
HOXC8P31273 Y_RNA.547-201ENST00000384654 119 ntBASIC1.3□□□□□ -2.2
HOXC8P31273 MIR518F-201ENST00000384973 87 ntBASIC1.3□□□□□ -2.2
HOXC8P31273 SNORD116-25-201ENST00000516517 92 ntBASIC1.3□□□□□ -2.2
HOXC8P31273 AC007751.1-201ENST00000529260 376 ntBASIC1.3□□□□□ -2.2
HOXC8P31273 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 212.5 ms