Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SNORA40.5-201ENST00000391061 128 ntBASIC-0.53□□□□□ -2.49
CD40LGP29965 SNORA36B-201ENST00000410438 131 ntBASIC-0.53□□□□□ -2.49
CD40LGP29965 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.53□□□□□ -2.49
CD40LGP29965 MTND4LP11-201ENST00000422184 280 ntBASIC-0.53□□□□□ -2.49
CD40LGP29965 AC109327.2-201ENST00000448339 378 ntBASIC-0.53□□□□□ -2.49
CD40LGP29965 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.53□□□□□ -2.49
CD40LGP29965 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 SNORD116-9-201ENST00000384000 95 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 SNORD116-3-201ENST00000384287 95 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 SNORD116-8-201ENST00000384365 95 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 SNORD116-7-201ENST00000384404 95 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 SNORD116-5-201ENST00000384462 95 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 SNORA69.1-201ENST00000390904 137 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 Y_RNA.592-201ENST00000410274 109 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 RNU6-938P-201ENST00000411285 103 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 AC009161.1-201ENST00000417306 376 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 MTND1P2-201ENST00000430604 821 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 RNU6-765P-201ENST00000516916 99 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 RNA5SP169-201ENST00000517268 117 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 RNU2-60P-201ENST00000517290 128 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 AC007751.1-201ENST00000529260 376 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 AL162726.3-218ENST00000636401 95 ntBASIC-0.54□□□□□ -2.5
CD40LGP29965 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.55□□□□□ -2.5
CD40LGP29965 MIR148A-201ENST00000362215 68 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 RNA5SP245-201ENST00000364239 121 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 RNU6-593P-201ENST00000364716 112 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 SNORA27-201ENST00000384323 126 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 RNU6-291P-201ENST00000384720 107 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 SNORD115-47-201ENST00000391226 86 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 MIR876-201ENST00000401147 81 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.55□□□□□ -2.5
CD40LGP29965 RPL39P25-201ENST00000449384 154 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 MTND3P10-201ENST00000450967 341 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 RN7SKP295-201ENST00000517264 153 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 MIR5706-201ENST00000579841 80 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 MIR4659A-201ENST00000580269 81 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 MIR4760-201ENST00000585040 80 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 DEFB117-201ENST00000602356 141 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 AL133255.1-201ENST00000606374 441 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 U7.6-201ENST00000610841 64 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.55□□□□□ -2.5
CD40LGP29965 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.55□□□□□ -2.5
CD40LGP29965 AP001282.2-201ENST00000616149 309 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 AL162376.1-201ENST00000624117 175 ntBASIC-0.55□□□□□ -2.5
CD40LGP29965 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.55□□□□□ -2.5
CD40LGP29965 RNA5SP98-201ENST00000363158 137 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 SNORD115-28-201ENST00000363931 81 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 RNU6-726P-201ENST00000364680 107 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 RNY3P4-201ENST00000384428 101 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 U8.15-201ENST00000390947 134 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 SNORD78.2-201ENST00000391076 69 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 HMGN2P22-201ENST00000427588 175 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.56□□□□□ -2.5
CD40LGP29965 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.56□□□□□ -2.5
CD40LGP29965 RPS29P24-201ENST00000486345 171 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 AC005899.2-201ENST00000584353 90 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.56□□□□□ -2.5
CD40LGP29965 RNU4-84P-201ENST00000364200 139 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 SNORA25.7-201ENST00000364375 127 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 SNORA1-201ENST00000384107 130 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 SNORA8.3-201ENST00000384679 139 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 RNU6-535P-201ENST00000384722 107 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 RPS3AP52-201ENST00000435639 297 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 RNU7-141P-201ENST00000459304 62 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 MTND5P34-201ENST00000568888 325 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 NAMPTP3-201ENST00000569273 224 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 AC124312.5-201ENST00000604451 268 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 RN7SL660P-201ENST00000614852 299 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 AC022140.2-201ENST00000623500 188 ntBASIC-0.57□□□□□ -2.5
CD40LGP29965 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.58□□□□□ -2.5
CD40LGP29965 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
CD40LGP29965 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.58□□□□□ -2.5
CD40LGP29965 RNU6-735P-201ENST00000410612 107 ntBASIC-0.58□□□□□ -2.5
CD40LGP29965 AC138749.4-201ENST00000563970 127 ntBASIC-0.58□□□□□ -2.5
CD40LGP29965 MIR4491-201ENST00000581087 68 ntBASIC-0.58□□□□□ -2.5
CD40LGP29965 AC063944.3-201ENST00000609969 533 ntBASIC-0.58□□□□□ -2.5
CD40LGP29965 SNORD81.1-201ENST00000363064 77 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 MIR548I3-201ENST00000408378 149 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 MIR548K-201ENST00000408406 116 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 MIR548F5-201ENST00000408421 86 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 RNU2-14P-201ENST00000411053 191 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 AC024067.1-201ENST00000426199 223 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 RNU7-149P-201ENST00000516739 59 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 OSBPL9P5-201ENST00000542581 171 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 AC005357.1-201ENST00000588399 301 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 AL662814.1-201ENST00000617364 121 ntBASIC-0.59□□□□□ -2.5
CD40LGP29965 AC078883.4-201ENST00000623218 367 ntBASIC-0.59□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms