Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-291P-201ENST00000384720 107 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 SNORA69.1-201ENST00000390904 137 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 SNORD78.2-201ENST00000391076 69 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 SNORD115-47-201ENST00000391226 86 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 SNORA36B-201ENST00000410438 131 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 RNA5SP25-201ENST00000410815 110 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 RPS29P24-201ENST00000486345 171 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 Y_RNA.717-201ENST00000517106 92 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 AC007751.1-201ENST00000529260 376 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.52□□□□□ -2.49
HLA-DMBP28068 SNORD115-28-201ENST00000363931 81 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 Y_RNA.570-201ENST00000384750 101 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 MIR5706-201ENST00000579841 80 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 RN7SKP299-201ENST00000606679 301 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 MIR3666-201ENST00000607845 111 ntBASIC-0.53□□□□□ -2.49
HLA-DMBP28068 RNU6-99P-201ENST00000364721 107 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 RNA5SP300-201ENST00000391197 107 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 AC024067.1-201ENST00000426199 223 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.54□□□□□ -2.5
HLA-DMBP28068 HAR1A.1-201ENST00000459583 118 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 RPL7P42-201ENST00000481005 679 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 MIR4423-201ENST00000580922 80 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 MIR4760-201ENST00000585040 80 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 AC006157.1-201ENST00000611750 366 ntBASIC-0.54□□□□□ -2.5
HLA-DMBP28068 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
HLA-DMBP28068 Y_RNA.157-201ENST00000363638 102 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 SNORD95.1-201ENST00000364099 68 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 U8.15-201ENST00000390947 134 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 MIR548K-201ENST00000408406 116 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.55□□□□□ -2.5
HLA-DMBP28068 RNU6-307P-201ENST00000516743 106 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 AC109635.3-201ENST00000529536 185 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 MIR3908-201ENST00000579798 126 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 MIR4659A-201ENST00000580269 81 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 DEFB117-201ENST00000602356 141 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 AC011921.3-201ENST00000605540 361 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 AC245008.1-201ENST00000608123 476 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 AP001282.2-201ENST00000616149 309 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 AL662814.1-201ENST00000617364 121 ntBASIC-0.55□□□□□ -2.5
HLA-DMBP28068 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 RNU6-403P-201ENST00000363163 104 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 Y_RNA.577-201ENST00000384794 101 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 SNORD77.3-201ENST00000391113 65 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 Y_RNA.587-201ENST00000391210 103 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 MIR548I3-201ENST00000408378 149 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 AC096949.1-201ENST00000412047 152 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-0.56□□□□□ -2.5
HLA-DMBP28068 MTND1P1-201ENST00000445453 368 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 MTND3P10-201ENST00000450967 341 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 RNU7-141P-201ENST00000459304 62 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 RNU2-60P-201ENST00000517290 128 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 AC005357.1-201ENST00000588399 301 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 U7.6-201ENST00000610841 64 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 AC011476.5-201ENST00000615594 130 ntBASIC-0.56□□□□□ -2.5
HLA-DMBP28068 SNORD81.1-201ENST00000363064 77 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 SNORD49B-201ENST00000365172 72 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RNU6-535P-201ENST00000384722 107 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 MIR224-201ENST00000384889 81 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RPL39P25-201ENST00000449384 154 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RNU7-96P-201ENST00000459535 64 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RNU6-475P-201ENST00000516073 104 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RNU7-149P-201ENST00000516739 59 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 MIR4491-201ENST00000581087 68 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 MIR3925-201ENST00000584674 77 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 AL442067.1-201ENST00000613261 223 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 MIR548AZ-201ENST00000616567 95 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 AC010205.1-201ENST00000616668 449 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 AL596211.1-201ENST00000569873 2277 ntBASIC-0.57□□□□□ -2.5
HLA-DMBP28068 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RNY4P3-201ENST00000365254 95 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RNU6-1156P-201ENST00000410365 100 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RPS3AP52-201ENST00000435639 297 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RPS29P8-201ENST00000445109 171 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RNU2-11P-201ENST00000459191 187 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RPS29P25-201ENST00000481709 171 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 AP003072.1-201ENST00000531740 145 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 CR383656.4-201ENST00000546909 122 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 MTND5P34-201ENST00000568888 325 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.58□□□□□ -2.5
HLA-DMBP28068 SNORA70.25-201ENST00000612741 95 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms