Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC069114.2-201ENST00000604699 304 ntBASIC3.18□□□□□ -1.9
VARSP26640 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VARSP26640 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VARSP26640 RNU6-457P-201ENST00000363999 107 ntBASIC3.17□□□□□ -1.9
VARSP26640 SNORA24-201ENST00000384096 131 ntBASIC3.17□□□□□ -1.9
VARSP26640 RNU6-524P-201ENST00000384270 107 ntBASIC3.17□□□□□ -1.9
VARSP26640 MIR34C-201ENST00000384831 77 ntBASIC3.17□□□□□ -1.9
VARSP26640 MIR452-201ENST00000385020 85 ntBASIC3.17□□□□□ -1.9
VARSP26640 AC115115.1-201ENST00000449927 248 ntBASIC3.17□□□□□ -1.9
VARSP26640 RNU7-73P-201ENST00000458743 63 ntBASIC3.17□□□□□ -1.9
VARSP26640 RN7SL499P-201ENST00000481141 276 ntBASIC3.17□□□□□ -1.9
VARSP26640 AL162274.2-201ENST00000614406 332 ntBASIC3.17□□□□□ -1.9
VARSP26640 MIR7112-201ENST00000616126 65 ntBASIC3.17□□□□□ -1.9
VARSP26640 AC243994.1-201ENST00000618627 109 ntBASIC3.17□□□□□ -1.9
VARSP26640 SNORD3E-202ENST00000627253 216 ntBASIC3.17□□□□□ -1.9
VARSP26640 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.17□□□□□ -1.9
VARSP26640 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.17□□□□□ -1.9
VARSP26640 AL355596.1-201ENST00000565399 3996 ntBASIC3.17□□□□□ -1.9
VARSP26640 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VARSP26640 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
VARSP26640 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VARSP26640 RNU6-342P-201ENST00000384521 104 ntBASIC3.16□□□□□ -1.9
VARSP26640 Y_RNA.567-201ENST00000384736 106 ntBASIC3.16□□□□□ -1.9
VARSP26640 SNORD28B-201ENST00000390993 75 ntBASIC3.16□□□□□ -1.9
VARSP26640 COTL1P1-201ENST00000422309 375 ntBASIC3.16□□□□□ -1.9
VARSP26640 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.16□□□□□ -1.9
VARSP26640 S100A11P2-201ENST00000467589 312 ntBASIC3.16□□□□□ -1.9
VARSP26640 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
VARSP26640 MIR548AR-201ENST00000582191 57 ntBASIC3.16□□□□□ -1.9
VARSP26640 AC005786.1-201ENST00000588553 154 ntBASIC3.16□□□□□ -1.9
VARSP26640 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VARSP26640 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VARSP26640 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VARSP26640 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
VARSP26640 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
VARSP26640 RNU6-1244P-201ENST00000363614 108 ntBASIC3.15□□□□□ -1.91
VARSP26640 Y_RNA.510-201ENST00000384511 114 ntBASIC3.15□□□□□ -1.91
VARSP26640 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
VARSP26640 HMGN1P33-201ENST00000432945 451 ntBASIC3.15□□□□□ -1.91
VARSP26640 AC245047.7-201ENST00000440265 293 ntBASIC3.15□□□□□ -1.91
VARSP26640 AC104389.3-201ENST00000445629 235 ntBASIC3.15□□□□□ -1.91
VARSP26640 AC093850.1-201ENST00000454121 251 ntBASIC3.15□□□□□ -1.91
VARSP26640 MIR5094-201ENST00000578766 85 ntBASIC3.15□□□□□ -1.91
VARSP26640 MIR4712-201ENST00000583750 82 ntBASIC3.15□□□□□ -1.91
VARSP26640 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
VARSP26640 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
VARSP26640 RNA5SP492-201ENST00000411330 114 ntBASIC3.14□□□□□ -1.91
VARSP26640 RPL31P63-201ENST00000422565 375 ntBASIC3.14□□□□□ -1.91
VARSP26640 RNU1-98P-201ENST00000458992 160 ntBASIC3.14□□□□□ -1.91
VARSP26640 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.14□□□□□ -1.91
VARSP26640 MIR6852-201ENST00000621699 66 ntBASIC3.14□□□□□ -1.91
VARSP26640 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
VARSP26640 AL365361.1-201ENST00000566942 3481 ntBASIC3.14□□□□□ -1.91
VARSP26640 Y_RNA.565-201ENST00000384719 101 ntBASIC3.13□□□□□ -1.91
VARSP26640 MIR887-201ENST00000401258 79 ntBASIC3.13□□□□□ -1.91
VARSP26640 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.13□□□□□ -1.91
VARSP26640 MIR548G-201ENST00000408442 89 ntBASIC3.13□□□□□ -1.91
VARSP26640 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.13□□□□□ -1.91
VARSP26640 AL161932.1-201ENST00000437408 146 ntBASIC3.13□□□□□ -1.91
VARSP26640 AC093729.1-201ENST00000513074 128 ntBASIC3.13□□□□□ -1.91
VARSP26640 RNU6-90P-201ENST00000606352 106 ntBASIC3.13□□□□□ -1.91
VARSP26640 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.13□□□□□ -1.91
VARSP26640 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
VARSP26640 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VARSP26640 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VARSP26640 RNU6-865P-201ENST00000364772 107 ntBASIC3.12□□□□□ -1.91
VARSP26640 Y_RNA.448-201ENST00000384185 108 ntBASIC3.12□□□□□ -1.91
VARSP26640 RNU6-950P-201ENST00000384651 107 ntBASIC3.12□□□□□ -1.91
VARSP26640 MIR519C-201ENST00000385053 87 ntBASIC3.12□□□□□ -1.91
VARSP26640 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VARSP26640 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.12□□□□□ -1.91
VARSP26640 UBE2DNL-203ENST00000474922 222 ntBASIC3.12□□□□□ -1.91
VARSP26640 AC026271.5-201ENST00000577873 130 ntBASIC3.12□□□□□ -1.91
VARSP26640 U4atac.1-201ENST00000618345 95 ntBASIC3.12□□□□□ -1.91
VARSP26640 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.12□□□□□ -1.91
VARSP26640 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VARSP26640 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
VARSP26640 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VARSP26640 RNU1-58P-201ENST00000362413 163 ntBASIC3.11□□□□□ -1.91
VARSP26640 RNU6-613P-201ENST00000410412 108 ntBASIC3.11□□□□□ -1.91
VARSP26640 SPINT5P-201ENST00000448174 155 ntBASIC3.11□□□□□ -1.91
VARSP26640 SNORD123-201ENST00000459473 70 ntBASIC3.11□□□□□ -1.91
VARSP26640 RNU7-35P-201ENST00000517174 62 ntBASIC3.11□□□□□ -1.91
VARSP26640 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.11□□□□□ -1.91
VARSP26640 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VARSP26640 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.1□□□□□ -1.91
VARSP26640 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.1□□□□□ -1.91
VARSP26640 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.1□□□□□ -1.91
VARSP26640 SNORD67.1-201ENST00000516618 108 ntBASIC3.1□□□□□ -1.91
VARSP26640 MIR2682-201ENST00000580305 110 ntBASIC3.1□□□□□ -1.91
VARSP26640 AC022202.1-201ENST00000613515 211 ntBASIC3.1□□□□□ -1.91
VARSP26640 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VARSP26640 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.1□□□□□ -1.91
VARSP26640 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
VARSP26640 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
VARSP26640 MIR422A-201ENST00000362286 90 ntBASIC3.09□□□□□ -1.91
VARSP26640 RNU6-1031P-201ENST00000384773 107 ntBASIC3.09□□□□□ -1.91
VARSP26640 RNU6-1086P-201ENST00000410930 100 ntBASIC3.09□□□□□ -1.91
VARSP26640 EIF4BP1-201ENST00000554881 351 ntBASIC3.09□□□□□ -1.91
VARSP26640 AL513043.2-201ENST00000573941 143 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms