Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 AC023449.1-201ENST00000454464 154 ntBASIC1.49□□□□□ -2.17
RXRAP19793 AC005840.1-201ENST00000498412 377 ntBASIC1.49□□□□□ -2.17
RXRAP19793 MIR3144-201ENST00000579460 79 ntBASIC1.49□□□□□ -2.17
RXRAP19793 MIR4431-201ENST00000579990 94 ntBASIC1.49□□□□□ -2.17
RXRAP19793 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
RXRAP19793 MIR4781-201ENST00000585250 76 ntBASIC1.49□□□□□ -2.17
RXRAP19793 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
RXRAP19793 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
RXRAP19793 uc_338.4-201ENST00000616635 176 ntBASIC1.49□□□□□ -2.17
RXRAP19793 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
RXRAP19793 SNORD45.3-201ENST00000363836 72 ntBASIC1.48□□□□□ -2.17
RXRAP19793 RNU4-84P-201ENST00000364200 139 ntBASIC1.48□□□□□ -2.17
RXRAP19793 RNU6-1138P-201ENST00000365359 106 ntBASIC1.48□□□□□ -2.17
RXRAP19793 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.48□□□□□ -2.17
RXRAP19793 AC107027.2-201ENST00000512197 115 ntBASIC1.48□□□□□ -2.17
RXRAP19793 RNU6-830P-201ENST00000516353 107 ntBASIC1.48□□□□□ -2.17
RXRAP19793 RN7SKP88-201ENST00000516847 250 ntBASIC1.48□□□□□ -2.17
RXRAP19793 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.48□□□□□ -2.17
RXRAP19793 7SK.8-201ENST00000612110 250 ntBASIC1.48□□□□□ -2.17
RXRAP19793 AC006441.5-201ENST00000612680 209 ntBASIC1.48□□□□□ -2.17
RXRAP19793 7SK.11-201ENST00000615477 250 ntBASIC1.48□□□□□ -2.17
RXRAP19793 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
RXRAP19793 7SK.13-201ENST00000622040 250 ntBASIC1.48□□□□□ -2.17
RXRAP19793 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RXRAP19793 RNU6-774P-201ENST00000363238 107 ntBASIC1.47□□□□□ -2.17
RXRAP19793 Y_RNA.170-201ENST00000363746 110 ntBASIC1.47□□□□□ -2.17
RXRAP19793 RNU6-268P-201ENST00000364174 107 ntBASIC1.47□□□□□ -2.17
RXRAP19793 Y_RNA.398-201ENST00000383952 99 ntBASIC1.47□□□□□ -2.17
RXRAP19793 SNORD116-18-201ENST00000383961 92 ntBASIC1.47□□□□□ -2.17
RXRAP19793 RNU6-643P-201ENST00000384018 107 ntBASIC1.47□□□□□ -2.17
RXRAP19793 SNORD72-201ENST00000390994 80 ntBASIC1.47□□□□□ -2.17
RXRAP19793 MIR548M-201ENST00000408260 86 ntBASIC1.47□□□□□ -2.17
RXRAP19793 AC006461.1-201ENST00000412637 326 ntBASIC1.47□□□□□ -2.17
RXRAP19793 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.47□□□□□ -2.17
RXRAP19793 SNORD77.4-201ENST00000516158 81 ntBASIC1.47□□□□□ -2.17
RXRAP19793 MTND5P41-201ENST00000517498 206 ntBASIC1.47□□□□□ -2.17
RXRAP19793 AC090821.2-201ENST00000523552 176 ntBASIC1.47□□□□□ -2.17
RXRAP19793 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
RXRAP19793 RNY1P10-201ENST00000363268 113 ntBASIC1.46□□□□□ -2.18
RXRAP19793 RNU6-1130P-201ENST00000365434 107 ntBASIC1.46□□□□□ -2.18
RXRAP19793 Y_RNA.432-201ENST00000384087 111 ntBASIC1.46□□□□□ -2.18
RXRAP19793 SNORD38C-201ENST00000384381 69 ntBASIC1.46□□□□□ -2.18
RXRAP19793 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
RXRAP19793 RNU6-239P-201ENST00000390990 99 ntBASIC1.46□□□□□ -2.18
RXRAP19793 RNU4-43P-201ENST00000410628 137 ntBASIC1.46□□□□□ -2.18
RXRAP19793 RNU6-1054P-201ENST00000411293 104 ntBASIC1.46□□□□□ -2.18
RXRAP19793 SNRPGP8-201ENST00000454064 226 ntBASIC1.46□□□□□ -2.18
RXRAP19793 SNORA74.3-201ENST00000517108 154 ntBASIC1.46□□□□□ -2.18
RXRAP19793 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
RXRAP19793 RNU6-449P-201ENST00000383914 107 ntBASIC1.45□□□□□ -2.18
RXRAP19793 RNU6-484P-201ENST00000384016 107 ntBASIC1.45□□□□□ -2.18
RXRAP19793 RNU6-746P-201ENST00000384112 109 ntBASIC1.45□□□□□ -2.18
RXRAP19793 MIR516B2-201ENST00000385190 85 ntBASIC1.45□□□□□ -2.18
RXRAP19793 MIR802-201ENST00000390235 94 ntBASIC1.45□□□□□ -2.18
RXRAP19793 Y_RNA.580-201ENST00000391004 95 ntBASIC1.45□□□□□ -2.18
RXRAP19793 SNORA79-201ENST00000408376 140 ntBASIC1.45□□□□□ -2.18
RXRAP19793 RNU2-55P-201ENST00000411146 174 ntBASIC1.45□□□□□ -2.18
RXRAP19793 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
RXRAP19793 TRMT112P2-201ENST00000512910 132 ntBASIC1.45□□□□□ -2.18
RXRAP19793 RNU6-1299P-201ENST00000516316 100 ntBASIC1.45□□□□□ -2.18
RXRAP19793 RNU7-149P-201ENST00000516739 59 ntBASIC1.45□□□□□ -2.18
RXRAP19793 MIR3133-201ENST00000583157 78 ntBASIC1.45□□□□□ -2.18
RXRAP19793 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.45□□□□□ -2.18
RXRAP19793 MTND1P7-201ENST00000632801 297 ntBASIC1.45□□□□□ -2.18
RXRAP19793 Y_RNA.506-201ENST00000384494 102 ntBASIC1.44□□□□□ -2.18
RXRAP19793 RNU6-125P-201ENST00000384505 107 ntBASIC1.44□□□□□ -2.18
RXRAP19793 MIR1287-201ENST00000408492 90 ntBASIC1.44□□□□□ -2.18
RXRAP19793 RNU7-200P-201ENST00000516105 62 ntBASIC1.44□□□□□ -2.18
RXRAP19793 RNU6-197P-201ENST00000516680 100 ntBASIC1.44□□□□□ -2.18
RXRAP19793 Y_RNA.703-201ENST00000516846 111 ntBASIC1.44□□□□□ -2.18
RXRAP19793 MIR4662B-201ENST00000579498 81 ntBASIC1.44□□□□□ -2.18
RXRAP19793 MIR8065-201ENST00000620577 100 ntBASIC1.44□□□□□ -2.18
RXRAP19793 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
RXRAP19793 Y_RNA.91-201ENST00000363042 107 ntBASIC1.43□□□□□ -2.18
RXRAP19793 Y_RNA.337-201ENST00000365312 102 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RNY1P5-201ENST00000383890 115 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RNU2-70P-201ENST00000410718 179 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RPL39P39-201ENST00000455840 151 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RNA5SP153-201ENST00000516498 76 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RNU7-121P-201ENST00000516604 62 ntBASIC1.43□□□□□ -2.18
RXRAP19793 RNU6-126P-201ENST00000516685 103 ntBASIC1.43□□□□□ -2.18
RXRAP19793 Pinc.1-201ENST00000616452 154 ntBASIC1.43□□□□□ -2.18
RXRAP19793 Y_RNA.226-201ENST00000364337 114 ntBASIC1.42□□□□□ -2.18
RXRAP19793 Y_RNA.521-201ENST00000384560 114 ntBASIC1.42□□□□□ -2.18
RXRAP19793 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
RXRAP19793 RNU6-346P-201ENST00000516288 111 ntBASIC1.42□□□□□ -2.18
RXRAP19793 SNORD111.1-201ENST00000516421 86 ntBASIC1.42□□□□□ -2.18
RXRAP19793 RNU7-43P-201ENST00000516554 64 ntBASIC1.42□□□□□ -2.18
RXRAP19793 AC097639.2-201ENST00000603159 172 ntBASIC1.42□□□□□ -2.18
RXRAP19793 Y_RNA.778-201ENST00000620203 90 ntBASIC1.42□□□□□ -2.18
RXRAP19793 MIR3658-201ENST00000636291 56 ntBASIC1.42□□□□□ -2.18
RXRAP19793 RNU6-151P-201ENST00000364158 107 ntBASIC1.41□□□□□ -2.18
RXRAP19793 Y_RNA.634-201ENST00000364811 113 ntBASIC1.41□□□□□ -2.18
RXRAP19793 RNU6-187P-201ENST00000384139 106 ntBASIC1.41□□□□□ -2.18
RXRAP19793 Y_RNA.486-201ENST00000384398 107 ntBASIC1.41□□□□□ -2.18
RXRAP19793 SNORA26-201ENST00000391286 122 ntBASIC1.41□□□□□ -2.18
RXRAP19793 SNORD116-25-201ENST00000516517 92 ntBASIC1.41□□□□□ -2.18
RXRAP19793 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.41□□□□□ -2.18
RXRAP19793 MIR378D2-201ENST00000580636 98 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 331.4 ms