Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SNORA63.4-201ENST00000362763 126 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 SNORA67.1-201ENST00000364749 141 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 MIR1267-201ENST00000408723 78 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
ITGA4P13612 RNA5SP57-201ENST00000459463 123 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 RNU6-589P-201ENST00000516485 107 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.31□□□□□ -2.04
ITGA4P13612 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
ITGA4P13612 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ITGA4P13612 MIR424-201ENST00000362227 98 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-34-201ENST00000362441 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 RNA5SP276-201ENST00000362580 94 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-12-201ENST00000362583 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-29-201ENST00000362834 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-9-201ENST00000362912 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-21-201ENST00000362963 81 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-14-201ENST00000363090 81 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-13-201ENST00000363358 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-41-201ENST00000363608 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-11-201ENST00000363616 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-5-201ENST00000363633 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-39-201ENST00000363694 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-4-201ENST00000363810 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-16-201ENST00000363887 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-6-201ENST00000363942 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-42-201ENST00000364273 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-15-201ENST00000364809 81 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-1-201ENST00000364961 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-26-201ENST00000365067 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-10-201ENST00000365073 81 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-43-201ENST00000365503 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-36-201ENST00000365629 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 Y_RNA.454-201ENST00000384224 113 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD116-21-201ENST00000384507 92 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 MIR526A1-201ENST00000384897 85 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 MIR548A1-201ENST00000385041 97 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 MIR136-201ENST00000385207 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 Y_RNA.649-201ENST00000459077 103 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 SNORD115-40-201ENST00000606510 82 ntBASIC2.3□□□□□ -2.04
ITGA4P13612 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ITGA4P13612 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ITGA4P13612 Y_RNA.35-201ENST00000362601 101 ntBASIC2.29□□□□□ -2.04
ITGA4P13612 MIR524-201ENST00000385242 87 ntBASIC2.29□□□□□ -2.04
ITGA4P13612 RNA5SP136-201ENST00000410906 107 ntBASIC2.29□□□□□ -2.04
ITGA4P13612 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
ITGA4P13612 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.29□□□□□ -2.04
ITGA4P13612 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ITGA4P13612 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
ITGA4P13612 RNU6-360P-201ENST00000390944 104 ntBASIC2.28□□□□□ -2.04
ITGA4P13612 RNU6-998P-201ENST00000515894 101 ntBASIC2.28□□□□□ -2.04
ITGA4P13612 RNY4P20-201ENST00000516678 93 ntBASIC2.28□□□□□ -2.04
ITGA4P13612 HSPE1P19-201ENST00000603327 295 ntBASIC2.28□□□□□ -2.04
ITGA4P13612 AC021443.1-201ENST00000604478 211 ntBASIC2.28□□□□□ -2.04
ITGA4P13612 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.28□□□□□ -2.04
ITGA4P13612 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.28□□□□□ -2.04
ITGA4P13612 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.28□□□□□ -2.04
ITGA4P13612 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
ITGA4P13612 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ITGA4P13612 RNU4-16P-201ENST00000364737 141 ntBASIC2.27□□□□□ -2.05
ITGA4P13612 RNA5SP160-201ENST00000364866 120 ntBASIC2.27□□□□□ -2.05
ITGA4P13612 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
ITGA4P13612 RNU7-96P-201ENST00000459535 64 ntBASIC2.27□□□□□ -2.05
ITGA4P13612 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.27□□□□□ -2.05
ITGA4P13612 AC078899.2-201ENST00000595282 212 ntBASIC2.27□□□□□ -2.05
ITGA4P13612 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 RNU6-153P-201ENST00000364422 104 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 SNORA1.2-201ENST00000365189 134 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 Y_RNA.370-201ENST00000365589 108 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 RNU6-203P-201ENST00000384038 104 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 RNU6-880P-201ENST00000384526 107 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 COX6CP6-201ENST00000490840 228 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 PDCD5P2-201ENST00000507570 312 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 MIR4524B-201ENST00000581569 115 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.26□□□□□ -2.05
ITGA4P13612 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.25□□□□□ -2.05
ITGA4P13612 RNA5SP432-201ENST00000362480 116 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 SNORA22-201ENST00000383907 134 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 MIR570-201ENST00000384917 97 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 AC063976.4-201ENST00000421971 163 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 AL035398.1-201ENST00000430869 322 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 AC011753.1-201ENST00000451001 220 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 RNU2-11P-201ENST00000459191 187 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 SNORD123-201ENST00000459473 70 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 AC107297.1-201ENST00000459991 176 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 SNORA31.4-201ENST00000516049 129 ntBASIC2.25□□□□□ -2.05
ITGA4P13612 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.25□□□□□ -2.05
ITGA4P13612 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.25□□□□□ -2.05
ITGA4P13612 MIR302B-201ENST00000362188 73 ntBASIC2.24□□□□□ -2.05
ITGA4P13612 SNORD28B-201ENST00000390993 75 ntBASIC2.24□□□□□ -2.05
ITGA4P13612 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.24□□□□□ -2.05
ITGA4P13612 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.24□□□□□ -2.05
ITGA4P13612 RNU7-164P-201ENST00000459221 62 ntBASIC2.24□□□□□ -2.05
ITGA4P13612 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.24□□□□□ -2.05
ITGA4P13612 SUMO2P16-201ENST00000519475 264 ntBASIC2.24□□□□□ -2.05
ITGA4P13612 FAM106DP-201ENST00000586416 501 ntBASIC2.24□□□□□ -2.05
ITGA4P13612 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms