Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL359851.1-201ENST00000569460 4997 ntBASIC2.17□□□□□ -2.06
COL6A2P12110 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
COL6A2P12110 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL6A2P12110 Y_RNA.81-201ENST00000362997 102 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 Y_RNA.351-201ENST00000365436 96 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 RNU6-1144P-201ENST00000384247 104 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 RN7SKP192-201ENST00000411291 327 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 RNU6-781P-201ENST00000516377 101 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
COL6A2P12110 SNORD53-201ENST00000579969 78 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 SNORD3E-202ENST00000627253 216 ntBASIC2.16□□□□□ -2.06
COL6A2P12110 RNU6-1123P-201ENST00000362347 106 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU6-349P-201ENST00000362402 107 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU6-1325P-201ENST00000364905 105 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 Y_RNA.346-201ENST00000365385 112 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 SNORA27-201ENST00000384323 126 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU6-476P-201ENST00000384726 107 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 MIR221-201ENST00000385135 110 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 AC093850.1-201ENST00000454121 251 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU6-919P-201ENST00000516731 104 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU7-70P-201ENST00000516941 66 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 AC002984.1-201ENST00000591692 448 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 AL137067.1-201ENST00000615933 120 ntBASIC2.15□□□□□ -2.07
COL6A2P12110 RNU1-133P-201ENST00000364867 167 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 SNORA1.2-201ENST00000365189 134 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 MIR676-201ENST00000390702 67 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 MIR1267-201ENST00000408723 78 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 RNA5SP136-201ENST00000410906 107 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.14□□□□□ -2.07
COL6A2P12110 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.14□□□□□ -2.07
COL6A2P12110 snoU13.15-201ENST00000459407 104 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL6A2P12110 MIR4778-201ENST00000577635 80 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 AC025166.1-201ENST00000612411 163 ntBASIC2.14□□□□□ -2.07
COL6A2P12110 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL6A2P12110 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL6A2P12110 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
COL6A2P12110 Y_RNA.241-201ENST00000364470 117 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 HMGN2P19-201ENST00000425149 265 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
COL6A2P12110 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 AL627230.6-201ENST00000611129 280 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 AC091932.4-201ENST00000623386 200 ntBASIC2.13□□□□□ -2.07
COL6A2P12110 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.12□□□□□ -2.07
COL6A2P12110 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL6A2P12110 Y_RNA.366-201ENST00000365540 102 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RNY1P6-201ENST00000384193 109 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 Y_RNA.494-201ENST00000384432 111 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 MIR526A1-201ENST00000384897 85 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 MIR516B2-201ENST00000385190 85 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RPL23AP6-201ENST00000446637 472 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RNU7-96P-201ENST00000459535 64 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 AC107297.1-201ENST00000459991 176 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RPS29P24-201ENST00000486345 171 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RNU6-998P-201ENST00000515894 101 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RNU2-13P-201ENST00000515909 113 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 RNU7-181P-201ENST00000517234 74 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 AL670379.3-201ENST00000605040 251 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 AL773524.1-201ENST00000614065 229 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
COL6A2P12110 ICE2P2-201ENST00000483823 2787 ntBASIC2.12□□□□□ -2.07
COL6A2P12110 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL6A2P12110 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL6A2P12110 RNU6-203P-201ENST00000384038 104 ntBASIC2.11□□□□□ -2.07
COL6A2P12110 RNA5SP425-201ENST00000410336 112 ntBASIC2.11□□□□□ -2.07
COL6A2P12110 AL161935.2-201ENST00000414627 60 ntBASIC2.11□□□□□ -2.07
COL6A2P12110 AC022254.1-201ENST00000567857 235 ntBASIC2.11□□□□□ -2.07
COL6A2P12110 MTND5P18-201ENST00000445624 1801 ntBASIC2.11□□□□□ -2.07
COL6A2P12110 RNA5SP276-201ENST00000362580 94 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 Y_RNA.370-201ENST00000365589 108 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 RNU6-429P-201ENST00000384582 108 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 AC004965.1-201ENST00000413033 213 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 AL035461.1-201ENST00000421490 332 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 RNA5SP57-201ENST00000459463 123 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 RNU6-240P-201ENST00000516098 97 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 SNORD33.1-201ENST00000516213 88 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 AC090821.2-201ENST00000523552 176 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 uc_338.20-201ENST00000621563 178 ntBASIC2.1□□□□□ -2.07
COL6A2P12110 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
COL6A2P12110 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
COL6A2P12110 RNU6-457P-201ENST00000363999 107 ntBASIC2.09□□□□□ -2.07
COL6A2P12110 RNU6-690P-201ENST00000365242 106 ntBASIC2.09□□□□□ -2.07
COL6A2P12110 SNORA24-201ENST00000384096 131 ntBASIC2.09□□□□□ -2.07
COL6A2P12110 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
COL6A2P12110 RNU4-53P-201ENST00000410828 140 ntBASIC2.09□□□□□ -2.07
COL6A2P12110 SNORD123-201ENST00000459473 70 ntBASIC2.09□□□□□ -2.07
COL6A2P12110 COX6CP6-201ENST00000490840 228 ntBASIC2.09□□□□□ -2.07
COL6A2P12110 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.09□□□□□ -2.07
COL6A2P12110 MIR3683-201ENST00000580847 82 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms