Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AF228730.3-201ENST00000436691 102 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 HMGN2P32-201ENST00000444648 269 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 RNU7-12P-201ENST00000516030 62 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 AC015726.2-201ENST00000620112 122 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 AP001340.1-201ENST00000624405 217 ntBASIC2.03□□□□□ -2.08
SNRPA1P09661 Y_RNA.52-201ENST00000362760 96 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 Y_RNA.294-201ENST00000364916 102 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 RNU6-1117P-201ENST00000384525 104 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 Y_RNA.547-201ENST00000384654 119 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 SNORD77.3-201ENST00000391113 65 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 MIR548I2-201ENST00000408348 149 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 AC093850.1-201ENST00000454121 251 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 AC099513.1-201ENST00000490423 301 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 RNA5SP481-201ENST00000516814 122 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 RNU2-60P-201ENST00000517290 128 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 AL359821.1-201ENST00000605519 182 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 AC027279.3-201ENST00000625055 122 ntBASIC2.02□□□□□ -2.09
SNRPA1P09661 RNU6-508P-201ENST00000363231 103 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 Y_RNA.218-201ENST00000364218 104 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 MIR891A-201ENST00000401237 79 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.01□□□□□ -2.09
SNRPA1P09661 RNU6-1234P-201ENST00000516877 103 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.01□□□□□ -2.09
SNRPA1P09661 MIR4781-201ENST00000585250 76 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 AL365222.1-201ENST00000614661 98 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 TUG1_4.1-201ENST00000619464 181 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 MIR376A2-201ENST00000636782 80 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.01□□□□□ -2.09
SNRPA1P09661 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2□□□□□ -2.09
SNRPA1P09661 RNU6-22P-201ENST00000384355 107 ntBASIC2□□□□□ -2.09
SNRPA1P09661 MIR517C-201ENST00000385103 95 ntBASIC2□□□□□ -2.09
SNRPA1P09661 SNORA67.6-201ENST00000391093 99 ntBASIC2□□□□□ -2.09
SNRPA1P09661 MIR4778-201ENST00000577635 80 ntBASIC2□□□□□ -2.09
SNRPA1P09661 BX248123.2-201ENST00000606318 124 ntBASIC2□□□□□ -2.09
SNRPA1P09661 U7.2-201ENST00000607576 63 ntBASIC2□□□□□ -2.09
SNRPA1P09661 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2□□□□□ -2.09
SNRPA1P09661 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNRPA1P09661 MTND5P32-201ENST00000560711 1802 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 Y_RNA.120-201ENST00000363304 110 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 RNU6-833P-201ENST00000363486 107 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 SNORD115-28-201ENST00000363931 81 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 RNU6-1292P-201ENST00000383856 107 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 MIR1323-201ENST00000408090 73 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 RNU5E-3P-201ENST00000515913 68 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 AC134878.1-201ENST00000619901 243 ntBASIC1.99□□□□□ -2.09
SNRPA1P09661 Y_RNA.71-201ENST00000362892 104 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 Y_RNA.291-201ENST00000364886 113 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 MIR539-201ENST00000365690 78 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 SNORD38C-201ENST00000384381 69 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 MIR516B2-201ENST00000385190 85 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 AC015922.2-201ENST00000435593 184 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 PGBD4P5-201ENST00000445958 426 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 Y_RNA.690-201ENST00000516603 95 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 SNORD36C-201ENST00000516733 66 ntBASIC1.98□□□□□ -2.09
SNRPA1P09661 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.98□□□□□ -2.09
SNRPA1P09661 Y_RNA.37-201ENST00000362606 108 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 RNU6-309P-201ENST00000364573 106 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 SNORD18B-201ENST00000365659 72 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 RNU6-62P-201ENST00000516526 102 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 RNU6-1149P-201ENST00000516810 97 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 AL513423.1-201ENST00000621695 132 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
SNRPA1P09661 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
SNRPA1P09661 Y_RNA.261-201ENST00000364631 102 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 RNU6-203P-201ENST00000384038 104 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 MIR660-201ENST00000385235 97 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 RNU2-51P-201ENST00000410708 197 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 RNU6-938P-201ENST00000411285 103 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 TRMT112P2-201ENST00000512910 132 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 MIR5197-201ENST00000583721 112 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.96□□□□□ -2.1
SNRPA1P09661 RNU6-235P-201ENST00000362644 107 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 RNU6-1189P-201ENST00000383958 107 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 RNU6-439P-201ENST00000384188 106 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 SNORA22C-201ENST00000384614 134 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 RNU6-360P-201ENST00000390944 104 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 RNU6-1154P-201ENST00000391001 104 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 AL603914.1-201ENST00000401964 204 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 RNA5SP247-201ENST00000411181 105 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.95□□□□□ -2.1
SNRPA1P09661 RNU4-57P-201ENST00000515980 135 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 RNU6-1333P-201ENST00000516162 93 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 Y_RNA.692-201ENST00000516627 105 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 SNORA31.24-201ENST00000517232 57 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 MIR4713-201ENST00000582691 75 ntBASIC1.95□□□□□ -2.1
SNRPA1P09661 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.94□□□□□ -2.1
SNRPA1P09661 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SNRPA1P09661 MIR424-201ENST00000362227 98 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 SNORD116-14-201ENST00000383894 92 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 SNORD116-17-201ENST00000383929 92 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 Y_RNA.410-201ENST00000383992 113 ntBASIC1.94□□□□□ -2.1
SNRPA1P09661 SNORD116-15-201ENST00000384445 92 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms