Protein–RNA interactions for Protein: P05556

ITGB1, Integrin beta-1, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1P05556 SNRPGP14-201ENST00000435400 219 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 SNORA31.10-201ENST00000516482 106 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 SNORD45.4-201ENST00000516629 73 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 RNU7-28P-201ENST00000516759 62 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 AC006441.5-201ENST00000612680 209 ntBASIC2.13□□□□□ -2.07
ITGB1P05556 Y_RNA.242-201ENST00000364473 110 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 Y_RNA.265-201ENST00000364677 108 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 snoU2-30.1-201ENST00000365012 70 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 Y_RNA.547-201ENST00000384654 119 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 RNU6-440P-201ENST00000390882 105 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 RNA5SP501-201ENST00000410990 112 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.12□□□□□ -2.07
ITGB1P05556 AL445685.2-201ENST00000422551 342 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 AC003989.2-201ENST00000440224 169 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 RNU6-1053P-201ENST00000515930 101 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 RNU6-240P-201ENST00000516098 97 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 MIR4679-2-201ENST00000578358 77 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.12□□□□□ -2.07
ITGB1P05556 AL627230.6-201ENST00000611129 280 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 AL137067.1-201ENST00000615933 120 ntBASIC2.12□□□□□ -2.07
ITGB1P05556 SNORD115-28-201ENST00000363931 81 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 SNORA2.2-201ENST00000365473 135 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 HSPE1P9-201ENST00000440046 311 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.11□□□□□ -2.07
ITGB1P05556 SNORD36C-201ENST00000516733 66 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 RNU6-1116P-201ENST00000517269 99 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 uc_338.28-201ENST00000612082 187 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 AC134878.1-201ENST00000619901 243 ntBASIC2.11□□□□□ -2.07
ITGB1P05556 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ITGB1P05556 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
ITGB1P05556 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ITGB1P05556 MIR450A1-201ENST00000362262 91 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 Y_RNA.37-201ENST00000362606 108 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 RNA5SP160-201ENST00000364866 120 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 RNU6-1189P-201ENST00000383958 107 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 RNU6-296P-201ENST00000384608 107 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 RNA5SP89-201ENST00000410300 108 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 RNU6-938P-201ENST00000411285 103 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 STAG3L5P-204ENST00000443759 179 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 RNU6-113P-201ENST00000516653 101 ntBASIC2.1□□□□□ -2.07
ITGB1P05556 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.1□□□□□ -2.07
ITGB1P05556 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ITGB1P05556 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
ITGB1P05556 RNU6-112P-201ENST00000363599 104 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 Y_RNA.226-201ENST00000364337 114 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 Y_RNA.410-201ENST00000383992 113 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 AC114811.1-201ENST00000507207 168 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 RNA5SP170-201ENST00000517150 101 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 RNA5SP437-201ENST00000517249 129 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 SNORA28-201ENST00000606769 126 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 AC015726.2-201ENST00000620112 122 ntBASIC2.09□□□□□ -2.07
ITGB1P05556 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 Y_RNA.116-201ENST00000363292 103 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 RNU6-950P-201ENST00000384651 107 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 Y_RNA.549-201ENST00000384657 102 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 MIR520A-201ENST00000384862 85 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 RNU6-168P-201ENST00000516189 101 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.08□□□□□ -2.08
ITGB1P05556 AC007012.1-201ENST00000567192 175 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 MIR4781-201ENST00000585250 76 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 AL442644.1-201ENST00000454390 3105 ntBASIC2.08□□□□□ -2.08
ITGB1P05556 Y_RNA.336-201ENST00000365307 109 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 SNORA4.2-201ENST00000365313 147 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 RN7SKP200-201ENST00000410564 320 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 RNA5SP136-201ENST00000410906 107 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 RPS26P48-201ENST00000491713 339 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 U1.36-201ENST00000620684 176 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
ITGB1P05556 RNU6-349P-201ENST00000362402 107 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 Y_RNA.43-201ENST00000362670 111 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 RNU6-457P-201ENST00000363999 107 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 RNU6-690P-201ENST00000365242 106 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 RNA5SP37-201ENST00000365420 130 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 Y_RNA.440-201ENST00000384120 114 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 MIR570-201ENST00000384917 97 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 RNY4P20-201ENST00000516678 93 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 AP003484.1-201ENST00000530974 250 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 snoU13.31-201ENST00000607291 104 ntBASIC2.06□□□□□ -2.08
ITGB1P05556 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.06□□□□□ -2.08
ITGB1P05556 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ITGB1P05556 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
ITGB1P05556 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
ITGB1P05556 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
ITGB1P05556 RNU6-1255P-201ENST00000363434 112 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 Y_RNA.281-201ENST00000364774 94 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 RNA5SP190-201ENST00000365222 118 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 RNU6-163P-201ENST00000384396 106 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 RNU6-106P-201ENST00000384405 107 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 RNU6-554P-201ENST00000410466 106 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.05□□□□□ -2.08
ITGB1P05556 HMGN2P32-201ENST00000444648 269 ntBASIC2.05□□□□□ -2.08
ITGB1P05556 AL031737.1-201ENST00000450125 223 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms