Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL162726.3-218ENST00000636401 95 ntBASIC2.61□□□□□ -1.99
PDGFAP04085 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.61□□□□□ -1.99
PDGFAP04085 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDGFAP04085 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.6□□□□□ -1.99
PDGFAP04085 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PDGFAP04085 Y_RNA.544-201ENST00000384650 113 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 SNORD28B-201ENST00000390993 75 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 RPL39P25-201ENST00000449384 154 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 RNU7-73P-201ENST00000458743 63 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 RNU7-113P-201ENST00000459273 62 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 RNU1-41P-201ENST00000516161 162 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 RNU1-48P-201ENST00000516400 162 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
PDGFAP04085 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.6□□□□□ -1.99
PDGFAP04085 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDGFAP04085 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PDGFAP04085 Y_RNA.537-201ENST00000384626 109 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 AL138827.1-201ENST00000402666 306 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 RPL23AP6-201ENST00000446637 472 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 RNA5SP57-201ENST00000459463 123 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 RNU6-237P-201ENST00000515985 71 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 SNORA74.3-201ENST00000517108 154 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 RNU2-19P-201ENST00000517288 84 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 MIR4791-201ENST00000607666 84 ntBASIC2.59□□□□□ -1.99
PDGFAP04085 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDGFAP04085 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.59□□□□□ -2
PDGFAP04085 RNU6-661P-201ENST00000362409 107 ntBASIC2.58□□□□□ -2
PDGFAP04085 SNORA22.1-201ENST00000362701 134 ntBASIC2.58□□□□□ -2
PDGFAP04085 RNU6-859P-201ENST00000362728 107 ntBASIC2.58□□□□□ -2
PDGFAP04085 RNU6-457P-201ENST00000363999 107 ntBASIC2.58□□□□□ -2
PDGFAP04085 MIR524-201ENST00000385242 87 ntBASIC2.58□□□□□ -2
PDGFAP04085 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
PDGFAP04085 AC008413.1-201ENST00000511864 177 ntBASIC2.58□□□□□ -2
PDGFAP04085 AC245884.12-201ENST00000615364 59 ntBASIC2.58□□□□□ -2
PDGFAP04085 AP001318.4-201ENST00000616637 121 ntBASIC2.58□□□□□ -2
PDGFAP04085 Y_RNA.78-201ENST00000362970 110 ntBASIC2.57□□□□□ -2
PDGFAP04085 RNU6-816P-201ENST00000390914 107 ntBASIC2.57□□□□□ -2
PDGFAP04085 RNU6-1268P-201ENST00000391214 107 ntBASIC2.57□□□□□ -2
PDGFAP04085 RNU6-1239P-201ENST00000391310 107 ntBASIC2.57□□□□□ -2
PDGFAP04085 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.57□□□□□ -2
PDGFAP04085 MIR5582-201ENST00000579697 68 ntBASIC2.57□□□□□ -2
PDGFAP04085 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
PDGFAP04085 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
PDGFAP04085 FO624990.1-201ENST00000636373 85 ntBASIC2.57□□□□□ -2
PDGFAP04085 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PDGFAP04085 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.56□□□□□ -2
PDGFAP04085 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDGFAP04085 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.56□□□□□ -2
PDGFAP04085 RNA5SP68-201ENST00000363885 119 ntBASIC2.56□□□□□ -2
PDGFAP04085 Y_RNA.348-201ENST00000365403 103 ntBASIC2.56□□□□□ -2
PDGFAP04085 Y_RNA.430-201ENST00000384081 110 ntBASIC2.56□□□□□ -2
PDGFAP04085 Y_RNA.507-201ENST00000384500 99 ntBASIC2.56□□□□□ -2
PDGFAP04085 RNY4P30-201ENST00000410216 95 ntBASIC2.56□□□□□ -2
PDGFAP04085 RNA5SP274-201ENST00000410484 108 ntBASIC2.56□□□□□ -2
PDGFAP04085 RNU4-69P-201ENST00000410677 143 ntBASIC2.56□□□□□ -2
PDGFAP04085 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
PDGFAP04085 RNU7-43P-201ENST00000516554 64 ntBASIC2.56□□□□□ -2
PDGFAP04085 AL020996.3-201ENST00000606617 222 ntBASIC2.56□□□□□ -2
PDGFAP04085 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
PDGFAP04085 AC087741.2-201ENST00000619415 172 ntBASIC2.56□□□□□ -2
PDGFAP04085 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.56□□□□□ -2
PDGFAP04085 MIR6841-201ENST00000637129 72 ntBASIC2.56□□□□□ -2
PDGFAP04085 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.56□□□□□ -2
PDGFAP04085 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PDGFAP04085 SNORD115-2-201ENST00000362842 82 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORD115-19-201ENST00000363098 82 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORD115-18-201ENST00000363293 82 ntBASIC2.55□□□□□ -2
PDGFAP04085 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
PDGFAP04085 Y_RNA.171-201ENST00000363760 102 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORD115-17-201ENST00000364612 82 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORD115-20-201ENST00000365099 82 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORA51.10-201ENST00000384418 136 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORA67.4-201ENST00000384688 142 ntBASIC2.55□□□□□ -2
PDGFAP04085 MIR9-1-201ENST00000385198 89 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORA26.6-201ENST00000391256 115 ntBASIC2.55□□□□□ -2
PDGFAP04085 snoU13.16-201ENST00000459350 104 ntBASIC2.55□□□□□ -2
PDGFAP04085 AC003982.1-202ENST00000469928 248 ntBASIC2.55□□□□□ -2
PDGFAP04085 RN7SL633P-201ENST00000488974 297 ntBASIC2.55□□□□□ -2
PDGFAP04085 AC113410.1-201ENST00000505029 247 ntBASIC2.55□□□□□ -2
PDGFAP04085 SNORA40.13-201ENST00000516379 120 ntBASIC2.55□□□□□ -2
PDGFAP04085 AC141557.1-201ENST00000540982 400 ntBASIC2.55□□□□□ -2
PDGFAP04085 MIR4446-201ENST00000578505 67 ntBASIC2.55□□□□□ -2
PDGFAP04085 AL049779.4-201ENST00000604500 156 ntBASIC2.55□□□□□ -2
PDGFAP04085 AL590808.1-201ENST00000618696 141 ntBASIC2.55□□□□□ -2
PDGFAP04085 Y_RNA.818-201ENST00000618813 71 ntBASIC2.55□□□□□ -2
PDGFAP04085 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.55□□□□□ -2
PDGFAP04085 MIR6717-201ENST00000622747 73 ntBASIC2.55□□□□□ -2
PDGFAP04085 AC095038.3-201ENST00000634439 195 ntBASIC2.55□□□□□ -2
PDGFAP04085 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
PDGFAP04085 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PDGFAP04085 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
PDGFAP04085 RNU6-913P-201ENST00000390913 95 ntBASIC2.54□□□□□ -2
PDGFAP04085 SNORD77B-201ENST00000391112 67 ntBASIC2.54□□□□□ -2
PDGFAP04085 AL023284.1-201ENST00000403956 276 ntBASIC2.54□□□□□ -2
PDGFAP04085 RNA5SP21-201ENST00000410917 96 ntBASIC2.54□□□□□ -2
PDGFAP04085 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.54□□□□□ -2
PDGFAP04085 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.54□□□□□ -2
PDGFAP04085 AC055731.1-201ENST00000474387 401 ntBASIC2.54□□□□□ -2
PDGFAP04085 RNA5SP148-201ENST00000516527 94 ntBASIC2.54□□□□□ -2
PDGFAP04085 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms