Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.525-201ENST00000384570 113 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 RNU6-735P-201ENST00000410612 107 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 Y_RNA.629-201ENST00000411368 105 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 AC025033.1-201ENST00000463883 194 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 RPS26P48-201ENST00000491713 339 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 Y_RNA.712-201ENST00000517011 92 ntBASIC2.49□□□□□ -2.01
PRPF40AO75400 RNU6-661P-201ENST00000362409 107 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 U8.2-201ENST00000363156 134 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 RNU6-690P-201ENST00000365242 106 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 SNORA70.7-201ENST00000384159 133 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 SNORD123-201ENST00000459473 70 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 RNU7-96P-201ENST00000459535 64 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 RPS29P24-201ENST00000486345 171 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 MIR4713-201ENST00000582691 75 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 AC002984.1-201ENST00000591692 448 ntBASIC2.48□□□□□ -2.01
PRPF40AO75400 MIR302B-201ENST00000362188 73 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 RNA5SP259-201ENST00000365541 109 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 MIR194-1-201ENST00000384892 85 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 MIR17-201ENST00000385012 84 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
PRPF40AO75400 MIR4299-201ENST00000577899 72 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 AC108081.1-201ENST00000604358 221 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 AC091932.4-201ENST00000623386 200 ntBASIC2.47□□□□□ -2.01
PRPF40AO75400 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF40AO75400 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.46□□□□□ -2.01
PRPF40AO75400 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PRPF40AO75400 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.46□□□□□ -2.02
PRPF40AO75400 Y_RNA.273-201ENST00000364703 102 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RNY1P6-201ENST00000384193 109 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 MIR513A1-201ENST00000385138 129 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RNA5SP425-201ENST00000410336 112 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 Y_RNA.617-201ENST00000410920 90 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 AL035398.1-201ENST00000430869 322 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RNU6-322P-201ENST00000516010 103 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RN7SKP19-201ENST00000516016 252 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RNU6-240P-201ENST00000516098 97 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RNU1-41P-201ENST00000516161 162 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 RNU1-48P-201ENST00000516400 162 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 AC022254.1-201ENST00000567857 235 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 AC095038.3-201ENST00000634439 195 ntBASIC2.46□□□□□ -2.02
PRPF40AO75400 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
PRPF40AO75400 SNORD58C-201ENST00000365223 64 ntBASIC2.45□□□□□ -2.02
PRPF40AO75400 RNU6-1067P-201ENST00000384752 107 ntBASIC2.45□□□□□ -2.02
PRPF40AO75400 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PRPF40AO75400 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.45□□□□□ -2.02
PRPF40AO75400 AL356320.1-201ENST00000429616 163 ntBASIC2.45□□□□□ -2.02
PRPF40AO75400 RNU6-998P-201ENST00000515894 101 ntBASIC2.45□□□□□ -2.02
PRPF40AO75400 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PRPF40AO75400 U6.95-201ENST00000636931 70 ntBASIC2.45□□□□□ -2.02
PRPF40AO75400 Y_RNA.366-201ENST00000365540 102 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 Y_RNA.494-201ENST00000384432 111 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 RNU7-67P-201ENST00000459003 62 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 UBL5P3-201ENST00000475112 231 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 RNU6-781P-201ENST00000516377 101 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.44□□□□□ -2.02
PRPF40AO75400 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 AL137067.1-201ENST00000615933 120 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 MIR3914-2-201ENST00000637339 95 ntBASIC2.44□□□□□ -2.02
PRPF40AO75400 RNU4-52P-201ENST00000384209 138 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 Y_RNA.563-201ENST00000384707 108 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 MIR1263-201ENST00000408324 86 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 MIR1261-201ENST00000408659 82 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 RN7SKP223-201ENST00000410582 62 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 RPS27P21-201ENST00000486977 252 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 RNU6-917P-201ENST00000516294 104 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 SNORA74.3-201ENST00000517108 154 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 MIR8074-201ENST00000615081 81 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 MIR6132-201ENST00000622083 109 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 MIR6873-201ENST00000622788 63 ntBASIC2.43□□□□□ -2.02
PRPF40AO75400 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRPF40AO75400 SNORD28B-201ENST00000390993 75 ntBASIC2.42□□□□□ -2.02
PRPF40AO75400 AL161935.2-201ENST00000414627 60 ntBASIC2.42□□□□□ -2.02
PRPF40AO75400 RNU2-11P-201ENST00000459191 187 ntBASIC2.42□□□□□ -2.02
PRPF40AO75400 RNU7-53P-201ENST00000516705 60 ntBASIC2.42□□□□□ -2.02
PRPF40AO75400 MIR548AR-201ENST00000582191 57 ntBASIC2.42□□□□□ -2.02
PRPF40AO75400 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRPF40AO75400 RNU6-834P-201ENST00000362367 110 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 RNU6-349P-201ENST00000362402 107 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 Y_RNA.346-201ENST00000365385 112 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 RNU6-1056P-201ENST00000383996 107 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 RPS29P29-201ENST00000456396 171 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.41□□□□□ -2.02
PRPF40AO75400 AC025166.1-201ENST00000612411 163 ntBASIC2.41□□□□□ -2.02
PRPF40AO75400 AL451046.2-201ENST00000403074 277 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 HMGN2P38-201ENST00000423806 265 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 RNU7-43P-201ENST00000516554 64 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 RNU6-958P-201ENST00000516995 106 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 MIR1273D-201ENST00000577266 86 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 AC021443.1-201ENST00000604478 211 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 AC243994.1-201ENST00000618627 109 ntBASIC2.4□□□□□ -2.03
PRPF40AO75400 RNU4-16P-201ENST00000364737 141 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 Y_RNA.353-201ENST00000365440 108 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 MIR570-201ENST00000384917 97 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 RNU6-1064P-201ENST00000410626 104 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 RNU2-40P-201ENST00000410833 196 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 Y_RNA.630-201ENST00000411370 108 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 270.2 ms