Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
VPS4BO75351 AP001340.1-201ENST00000624405 217 ntBASIC1.82□□□□□ -2.12
VPS4BO75351 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 RNA5SP190-201ENST00000365222 118 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 Y_RNA.466-201ENST00000384294 113 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 MIR653-201ENST00000385279 96 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
VPS4BO75351 RNU4-61P-201ENST00000411243 107 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.81□□□□□ -2.12
VPS4BO75351 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 RNU6-426P-201ENST00000516464 97 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 AC024614.2-201ENST00000577584 372 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 AC015688.6-201ENST00000577737 104 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 MIR3910-1-201ENST00000580936 111 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 MIR8070-201ENST00000616510 88 ntBASIC1.81□□□□□ -2.12
VPS4BO75351 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
VPS4BO75351 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
VPS4BO75351 BTF3P4-201ENST00000418852 495 ntBASIC1.8□□□□□ -2.12
VPS4BO75351 MIR5197-201ENST00000583721 112 ntBASIC1.8□□□□□ -2.12
VPS4BO75351 MIR376A2-201ENST00000636782 80 ntBASIC1.8□□□□□ -2.12
VPS4BO75351 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
VPS4BO75351 RNU6-81P-201ENST00000365608 104 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 MIR136-201ENST00000385207 82 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 RPL31P63-201ENST00000422565 375 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 TMSB4XP3-201ENST00000445144 114 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 SNORA25.12-201ENST00000516202 82 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 SNORA18.4-201ENST00000516440 124 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 SCARNA15-202ENST00000516881 127 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 RNU6-789P-201ENST00000517105 102 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 MIR3618-201ENST00000580330 88 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 AP001485.1-201ENST00000604799 199 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 AL359821.1-201ENST00000605519 182 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 AC015726.2-201ENST00000620112 122 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS4BO75351 AC010332.2-201ENST00000613083 1904 ntBASIC1.79□□□□□ -2.12
VPS4BO75351 MIR302D-201ENST00000362275 68 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 Y_RNA.52-201ENST00000362760 96 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 Y_RNA.120-201ENST00000363304 110 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 SNORD113-1-201ENST00000365321 69 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 SNORA2.2-201ENST00000365473 135 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 Y_RNA.584-201ENST00000391090 114 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 Y_RNA.586-201ENST00000391146 98 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 MIR1267-201ENST00000408723 78 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 RNU6-917P-201ENST00000516294 104 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 RNU2-60P-201ENST00000517290 128 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 SUMO2P16-201ENST00000519475 264 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 SNRPGP19-201ENST00000603826 189 ntBASIC1.78□□□□□ -2.12
VPS4BO75351 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
VPS4BO75351 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
VPS4BO75351 RNU6-1189P-201ENST00000383958 107 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 Y_RNA.420-201ENST00000384043 110 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 Y_RNA.440-201ENST00000384120 114 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 SNORA17.3-201ENST00000391159 129 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 RNU6-257P-201ENST00000410238 98 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 RNA5SP236-201ENST00000516169 116 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 SNORD36C-201ENST00000516733 66 ntBASIC1.77□□□□□ -2.13
VPS4BO75351 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.77□□□□□ -2.13
VPS4BO75351 Y_RNA.116-201ENST00000363292 103 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 MIR513A1-201ENST00000385138 129 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 MIR516B2-201ENST00000385190 85 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 RNU6-460P-201ENST00000391158 108 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 U8.17-201ENST00000391292 132 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 RNU2-13P-201ENST00000515909 113 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 AP003484.1-201ENST00000530974 250 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 AC090049.2-201ENST00000550377 109 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.76□□□□□ -2.13
VPS4BO75351 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.75□□□□□ -2.13
VPS4BO75351 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-34-201ENST00000362441 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-12-201ENST00000362583 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-29-201ENST00000362834 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-9-201ENST00000362912 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-21-201ENST00000362963 81 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-14-201ENST00000363090 81 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-13-201ENST00000363358 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-41-201ENST00000363608 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-11-201ENST00000363616 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-5-201ENST00000363633 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-39-201ENST00000363694 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-4-201ENST00000363810 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-16-201ENST00000363887 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-6-201ENST00000363942 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-42-201ENST00000364273 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-15-201ENST00000364809 81 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-1-201ENST00000364961 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-26-201ENST00000365067 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-10-201ENST00000365073 81 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-43-201ENST00000365503 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORD115-36-201ENST00000365629 82 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 MIR30A-201ENST00000385092 71 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 SNORA40-201ENST00000388090 126 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 AL603914.1-201ENST00000401964 204 ntBASIC1.75□□□□□ -2.13
VPS4BO75351 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 1167.6 ms