Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC090049.2-201ENST00000550377 109 ntBASIC1.91□□□□□ -2.1
PROM1O43490 AL022345.2-201ENST00000606307 135 ntBASIC1.91□□□□□ -2.1
PROM1O43490 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
PROM1O43490 AC027279.3-201ENST00000625055 122 ntBASIC1.91□□□□□ -2.1
PROM1O43490 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.91□□□□□ -2.1
PROM1O43490 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PROM1O43490 RNA5SP205-201ENST00000364653 136 ntBASIC1.9□□□□□ -2.11
PROM1O43490 RNU6-1189P-201ENST00000383958 107 ntBASIC1.9□□□□□ -2.11
PROM1O43490 U8.13-201ENST00000390842 128 ntBASIC1.9□□□□□ -2.11
PROM1O43490 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
PROM1O43490 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.9□□□□□ -2.11
PROM1O43490 RNU6-1061P-201ENST00000516530 99 ntBASIC1.9□□□□□ -2.11
PROM1O43490 AC133485.4-201ENST00000561835 220 ntBASIC1.9□□□□□ -2.11
PROM1O43490 AC138907.4-201ENST00000570107 226 ntBASIC1.9□□□□□ -2.11
PROM1O43490 MIR3121-201ENST00000579680 77 ntBASIC1.9□□□□□ -2.11
PROM1O43490 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
PROM1O43490 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
PROM1O43490 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
PROM1O43490 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.89□□□□□ -2.11
PROM1O43490 AP000648.3-201ENST00000623539 4507 ntBASIC1.89□□□□□ -2.11
PROM1O43490 Y_RNA.37-201ENST00000362606 108 ntBASIC1.89□□□□□ -2.11
PROM1O43490 SNORA2.2-201ENST00000365473 135 ntBASIC1.89□□□□□ -2.11
PROM1O43490 Y_RNA.410-201ENST00000383992 113 ntBASIC1.89□□□□□ -2.11
PROM1O43490 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
PROM1O43490 RNA5SP489-201ENST00000410986 109 ntBASIC1.89□□□□□ -2.11
PROM1O43490 AC093850.1-201ENST00000454121 251 ntBASIC1.89□□□□□ -2.11
PROM1O43490 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
PROM1O43490 RN7SKP179-201ENST00000516126 217 ntBASIC1.89□□□□□ -2.11
PROM1O43490 RNU6-659P-201ENST00000516454 104 ntBASIC1.89□□□□□ -2.11
PROM1O43490 SNORD36C-201ENST00000516733 66 ntBASIC1.89□□□□□ -2.11
PROM1O43490 SNORA18.7-201ENST00000516910 131 ntBASIC1.89□□□□□ -2.11
PROM1O43490 RNU7-70P-201ENST00000516941 66 ntBASIC1.89□□□□□ -2.11
PROM1O43490 SNORA31.17-201ENST00000516953 127 ntBASIC1.89□□□□□ -2.11
PROM1O43490 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.89□□□□□ -2.11
PROM1O43490 MIR5197-201ENST00000583721 112 ntBASIC1.89□□□□□ -2.11
PROM1O43490 AC021506.2-201ENST00000612354 169 ntBASIC1.89□□□□□ -2.11
PROM1O43490 MIR376A2-201ENST00000636782 80 ntBASIC1.89□□□□□ -2.11
PROM1O43490 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PROM1O43490 RNU6-833P-201ENST00000363486 107 ntBASIC1.88□□□□□ -2.11
PROM1O43490 RNA5SP100-201ENST00000410903 110 ntBASIC1.88□□□□□ -2.11
PROM1O43490 RNA5SP59-201ENST00000410922 110 ntBASIC1.88□□□□□ -2.11
PROM1O43490 AC015922.2-201ENST00000435593 184 ntBASIC1.88□□□□□ -2.11
PROM1O43490 AL158147.1-201ENST00000443970 75 ntBASIC1.88□□□□□ -2.11
PROM1O43490 RNU6-772P-201ENST00000516042 105 ntBASIC1.88□□□□□ -2.11
PROM1O43490 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.88□□□□□ -2.11
PROM1O43490 AP003484.1-201ENST00000530974 250 ntBASIC1.88□□□□□ -2.11
PROM1O43490 MIR4778-201ENST00000577635 80 ntBASIC1.88□□□□□ -2.11
PROM1O43490 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.88□□□□□ -2.11
PROM1O43490 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.88□□□□□ -2.11
PROM1O43490 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.88□□□□□ -2.11
PROM1O43490 WWP1P1-201ENST00000466609 2769 ntBASIC1.88□□□□□ -2.11
PROM1O43490 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
PROM1O43490 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
PROM1O43490 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
PROM1O43490 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
PROM1O43490 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PROM1O43490 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
PROM1O43490 RNU6-647P-201ENST00000364243 107 ntBASIC1.87□□□□□ -2.11
PROM1O43490 Y_RNA.226-201ENST00000364337 114 ntBASIC1.87□□□□□ -2.11
PROM1O43490 MIR516B2-201ENST00000385190 85 ntBASIC1.87□□□□□ -2.11
PROM1O43490 Y_RNA.629-201ENST00000411368 105 ntBASIC1.87□□□□□ -2.11
PROM1O43490 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.87□□□□□ -2.11
PROM1O43490 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
PROM1O43490 SNORA44.1-201ENST00000517031 108 ntBASIC1.87□□□□□ -2.11
PROM1O43490 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
PROM1O43490 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.87□□□□□ -2.11
PROM1O43490 AC103810.8-201ENST00000607347 118 ntBASIC1.87□□□□□ -2.11
PROM1O43490 MIR7111-201ENST00000619751 72 ntBASIC1.87□□□□□ -2.11
PROM1O43490 SNORD3E-202ENST00000627253 216 ntBASIC1.87□□□□□ -2.11
PROM1O43490 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
PROM1O43490 Y_RNA.241-201ENST00000364470 117 ntBASIC1.86□□□□□ -2.11
PROM1O43490 PGBD4P5-201ENST00000445958 426 ntBASIC1.86□□□□□ -2.11
PROM1O43490 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
PROM1O43490 RNU6-1053P-201ENST00000515930 101 ntBASIC1.86□□□□□ -2.11
PROM1O43490 SCARNA15-202ENST00000516881 127 ntBASIC1.86□□□□□ -2.11
PROM1O43490 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
PROM1O43490 MIR342-201ENST00000362212 99 ntBASIC1.85□□□□□ -2.11
PROM1O43490 MIR452-201ENST00000385020 85 ntBASIC1.85□□□□□ -2.11
PROM1O43490 SNX2P2-201ENST00000424553 323 ntBASIC1.85□□□□□ -2.11
PROM1O43490 Y_RNA.651-201ENST00000459380 103 ntBASIC1.85□□□□□ -2.11
PROM1O43490 RNA5SP236-201ENST00000516169 116 ntBASIC1.85□□□□□ -2.11
PROM1O43490 AL513423.1-201ENST00000621695 132 ntBASIC1.85□□□□□ -2.11
PROM1O43490 Y_RNA.273-201ENST00000364703 102 ntBASIC1.84□□□□□ -2.11
PROM1O43490 MIR660-201ENST00000385235 97 ntBASIC1.84□□□□□ -2.11
PROM1O43490 AC019129.1-201ENST00000403786 261 ntBASIC1.84□□□□□ -2.11
PROM1O43490 AC087499.4-201ENST00000448505 178 ntBASIC1.84□□□□□ -2.11
PROM1O43490 AC099513.1-201ENST00000490423 301 ntBASIC1.84□□□□□ -2.11
PROM1O43490 RNU7-181P-201ENST00000517234 74 ntBASIC1.84□□□□□ -2.11
PROM1O43490 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
PROM1O43490 MIR6845-201ENST00000613182 61 ntBASIC1.84□□□□□ -2.11
PROM1O43490 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
PROM1O43490 MIR337-201ENST00000362281 93 ntBASIC1.83□□□□□ -2.12
PROM1O43490 Y_RNA.280-201ENST00000364765 112 ntBASIC1.83□□□□□ -2.12
PROM1O43490 Y_RNA.351-201ENST00000365436 96 ntBASIC1.83□□□□□ -2.12
PROM1O43490 Y_RNA.440-201ENST00000384120 114 ntBASIC1.83□□□□□ -2.12
PROM1O43490 SNORA40.5-201ENST00000391061 128 ntBASIC1.83□□□□□ -2.12
PROM1O43490 RNU6-938P-201ENST00000411285 103 ntBASIC1.83□□□□□ -2.12
PROM1O43490 MTND5P34-201ENST00000568888 325 ntBASIC1.83□□□□□ -2.12
PROM1O43490 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.83□□□□□ -2.12
PROM1O43490 AC108081.1-201ENST00000604358 221 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms