Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 U8.5-201ENST00000364528 136 ntBASIC1.09□□□□□ -2.23
CDX4O14627 Y_RNA.412-201ENST00000384001 104 ntBASIC1.09□□□□□ -2.23
CDX4O14627 RNU6-424P-201ENST00000384367 105 ntBASIC1.09□□□□□ -2.23
CDX4O14627 RNU6-578P-201ENST00000390980 103 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.09□□□□□ -2.23
CDX4O14627 AC093850.1-201ENST00000454121 251 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AC023449.1-201ENST00000454464 154 ntBASIC1.09□□□□□ -2.23
CDX4O14627 RNU7-120P-201ENST00000459334 63 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AC114811.1-201ENST00000507207 168 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AC074198.2-201ENST00000508153 258 ntBASIC1.09□□□□□ -2.23
CDX4O14627 RNU7-12P-201ENST00000516030 62 ntBASIC1.09□□□□□ -2.23
CDX4O14627 SNORD45.4-201ENST00000516629 73 ntBASIC1.09□□□□□ -2.23
CDX4O14627 RNU7-149P-201ENST00000516739 59 ntBASIC1.09□□□□□ -2.23
CDX4O14627 MIR4778-201ENST00000577635 80 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AC072026.1-201ENST00000605023 201 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AC108706.1-201ENST00000611053 297 ntBASIC1.09□□□□□ -2.23
CDX4O14627 AL391903.3-201ENST00000612158 163 ntBASIC1.09□□□□□ -2.23
CDX4O14627 Pinc.1-201ENST00000616452 154 ntBASIC1.09□□□□□ -2.23
CDX4O14627 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CDX4O14627 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CDX4O14627 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.24
CDX4O14627 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
CDX4O14627 Y_RNA.121-201ENST00000363309 113 ntBASIC1.08□□□□□ -2.24
CDX4O14627 RNU6-103P-201ENST00000363686 107 ntBASIC1.08□□□□□ -2.24
CDX4O14627 Y_RNA.435-201ENST00000384095 112 ntBASIC1.08□□□□□ -2.24
CDX4O14627 RNU6-163P-201ENST00000384396 106 ntBASIC1.08□□□□□ -2.24
CDX4O14627 RNU6-1228P-201ENST00000391014 107 ntBASIC1.08□□□□□ -2.24
CDX4O14627 AL121914.1-201ENST00000450188 156 ntBASIC1.08□□□□□ -2.24
CDX4O14627 RNU6-322P-201ENST00000516010 103 ntBASIC1.08□□□□□ -2.24
CDX4O14627 Y_RNA.714-201ENST00000517065 90 ntBASIC1.08□□□□□ -2.24
CDX4O14627 AC109810.1-201ENST00000534066 224 ntBASIC1.08□□□□□ -2.24
CDX4O14627 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.08□□□□□ -2.24
CDX4O14627 AC008507.4-201ENST00000585464 127 ntBASIC1.08□□□□□ -2.24
CDX4O14627 AL513534.2-201ENST00000603836 250 ntBASIC1.08□□□□□ -2.24
CDX4O14627 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
CDX4O14627 RNU6-199P-201ENST00000362954 107 ntBASIC1.07□□□□□ -2.24
CDX4O14627 SNORD45.3-201ENST00000363836 72 ntBASIC1.07□□□□□ -2.24
CDX4O14627 snoU2-30.1-201ENST00000365012 70 ntBASIC1.07□□□□□ -2.24
CDX4O14627 Y_RNA.486-201ENST00000384398 107 ntBASIC1.07□□□□□ -2.24
CDX4O14627 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.07□□□□□ -2.24
CDX4O14627 SNORD77.4-201ENST00000516158 81 ntBASIC1.07□□□□□ -2.24
CDX4O14627 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
CDX4O14627 AC120024.3-201ENST00000603167 156 ntBASIC1.07□□□□□ -2.24
CDX4O14627 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
CDX4O14627 FTX_2.1-201ENST00000618816 94 ntBASIC1.07□□□□□ -2.24
CDX4O14627 Y_RNA.75-201ENST00000362927 97 ntBASIC1.06□□□□□ -2.24
CDX4O14627 Y_RNA.270-201ENST00000364693 104 ntBASIC1.06□□□□□ -2.24
CDX4O14627 RNU6-275P-201ENST00000364910 107 ntBASIC1.06□□□□□ -2.24
CDX4O14627 RNU6-728P-201ENST00000365375 104 ntBASIC1.06□□□□□ -2.24
CDX4O14627 RNU6-484P-201ENST00000384016 107 ntBASIC1.06□□□□□ -2.24
CDX4O14627 RNY3P5-201ENST00000384127 102 ntBASIC1.06□□□□□ -2.24
CDX4O14627 RNY1P4-201ENST00000384595 115 ntBASIC1.06□□□□□ -2.24
CDX4O14627 MIR15B-201ENST00000385045 98 ntBASIC1.06□□□□□ -2.24
CDX4O14627 CYCTP-201ENST00000504253 315 ntBASIC1.06□□□□□ -2.24
CDX4O14627 RNU6-1299P-201ENST00000516316 100 ntBASIC1.06□□□□□ -2.24
CDX4O14627 MRPS18CP4-201ENST00000535821 231 ntBASIC1.06□□□□□ -2.24
CDX4O14627 MIR7974-201ENST00000615835 79 ntBASIC1.06□□□□□ -2.24
CDX4O14627 AC106754.2-201ENST00000623006 233 ntBASIC1.06□□□□□ -2.24
CDX4O14627 Y_RNA.91-201ENST00000363042 107 ntBASIC1.05□□□□□ -2.24
CDX4O14627 SNORD14E-201ENST00000364009 85 ntBASIC1.05□□□□□ -2.24
CDX4O14627 Y_RNA.240-201ENST00000364469 95 ntBASIC1.05□□□□□ -2.24
CDX4O14627 RNU6-1138P-201ENST00000365359 106 ntBASIC1.05□□□□□ -2.24
CDX4O14627 MIR150-201ENST00000385048 84 ntBASIC1.05□□□□□ -2.24
CDX4O14627 MIR802-201ENST00000390235 94 ntBASIC1.05□□□□□ -2.24
CDX4O14627 PCNPP3-201ENST00000393579 471 ntBASIC1.05□□□□□ -2.24
CDX4O14627 MIR891A-201ENST00000401237 79 ntBASIC1.05□□□□□ -2.24
CDX4O14627 SEPT7P4-201ENST00000437076 306 ntBASIC1.05□□□□□ -2.24
CDX4O14627 Y_RNA.662-201ENST00000516028 97 ntBASIC1.05□□□□□ -2.24
CDX4O14627 Y_RNA.666-201ENST00000516187 112 ntBASIC1.05□□□□□ -2.24
CDX4O14627 AL512310.8-201ENST00000550183 120 ntBASIC1.05□□□□□ -2.24
CDX4O14627 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.05□□□□□ -2.24
CDX4O14627 AC098479.1-201ENST00000609225 154 ntBASIC1.05□□□□□ -2.24
CDX4O14627 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.05□□□□□ -2.24
CDX4O14627 MIR8065-201ENST00000620577 100 ntBASIC1.05□□□□□ -2.24
CDX4O14627 RNU6-833P-201ENST00000363486 107 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU6-268P-201ENST00000364174 107 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU6-312P-201ENST00000364629 107 ntBASIC1.04□□□□□ -2.24
CDX4O14627 Y_RNA.634-201ENST00000364811 113 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU1-133P-201ENST00000364867 167 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU6-442P-201ENST00000383968 104 ntBASIC1.04□□□□□ -2.24
CDX4O14627 Y_RNA.432-201ENST00000384087 111 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU6-886P-201ENST00000384319 105 ntBASIC1.04□□□□□ -2.24
CDX4O14627 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
CDX4O14627 RNU2-70P-201ENST00000410718 179 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU2-55P-201ENST00000411146 174 ntBASIC1.04□□□□□ -2.24
CDX4O14627 RNU5E-9P-201ENST00000411164 104 ntBASIC1.04□□□□□ -2.24
CDX4O14627 AC006461.1-201ENST00000412637 326 ntBASIC1.04□□□□□ -2.24
CDX4O14627 SNRPGP14-201ENST00000435400 219 ntBASIC1.04□□□□□ -2.24
CDX4O14627 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.04□□□□□ -2.24
CDX4O14627 CYP3A137P-201ENST00000562436 69 ntBASIC1.04□□□□□ -2.24
CDX4O14627 MIR3664-201ENST00000579074 99 ntBASIC1.04□□□□□ -2.24
CDX4O14627 AC087685.1-201ENST00000587507 141 ntBASIC1.04□□□□□ -2.24
CDX4O14627 AC027279.3-201ENST00000625055 122 ntBASIC1.04□□□□□ -2.24
CDX4O14627 Y_RNA.23-201ENST00000362496 106 ntBASIC1.03□□□□□ -2.24
CDX4O14627 Y_RNA.336-201ENST00000365307 109 ntBASIC1.03□□□□□ -2.24
CDX4O14627 SNORA2.2-201ENST00000365473 135 ntBASIC1.03□□□□□ -2.24
CDX4O14627 MIR526A1-201ENST00000384897 85 ntBASIC1.03□□□□□ -2.24
CDX4O14627 MIR216A-201ENST00000385063 110 ntBASIC1.03□□□□□ -2.24
CDX4O14627 MIR516B2-201ENST00000385190 85 ntBASIC1.03□□□□□ -2.24
CDX4O14627 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 368.4 ms