Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
H3BM21 SNORA1.2-201ENST00000365189 134 ntBASIC3.14□□□□□ -1.91
H3BM21 RNU6-805P-201ENST00000365643 106 ntBASIC3.14□□□□□ -1.91
H3BM21 COTL1P1-201ENST00000422309 375 ntBASIC3.14□□□□□ -1.91
H3BM21 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.14□□□□□ -1.91
H3BM21 AC245047.7-201ENST00000440265 293 ntBASIC3.14□□□□□ -1.91
H3BM21 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.14□□□□□ -1.91
H3BM21 RPS29P29-201ENST00000456396 171 ntBASIC3.14□□□□□ -1.91
H3BM21 RN7SL297P-201ENST00000483161 293 ntBASIC3.14□□□□□ -1.91
H3BM21 SNORA64.4-201ENST00000516632 81 ntBASIC3.14□□□□□ -1.91
H3BM21 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
H3BM21 EIF4BP1-201ENST00000554881 351 ntBASIC3.14□□□□□ -1.91
H3BM21 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
H3BM21 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.14□□□□□ -1.91
H3BM21 UCA1.1-201ENST00000620952 75 ntBASIC3.14□□□□□ -1.91
H3BM21 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
H3BM21 AC009487.2-201ENST00000420969 6821 ntBASIC3.14□□□□□ -1.91
H3BM21 SNORD115-31-201ENST00000365318 82 ntBASIC3.13□□□□□ -1.91
H3BM21 Y_RNA.370-201ENST00000365589 108 ntBASIC3.13□□□□□ -1.91
H3BM21 RNU6-614P-201ENST00000384369 107 ntBASIC3.13□□□□□ -1.91
H3BM21 RNU6-1241P-201ENST00000384536 107 ntBASIC3.13□□□□□ -1.91
H3BM21 RNU6-913P-201ENST00000390913 95 ntBASIC3.13□□□□□ -1.91
H3BM21 SRIP3-201ENST00000413200 219 ntBASIC3.13□□□□□ -1.91
H3BM21 AC245047.3-201ENST00000429428 127 ntBASIC3.13□□□□□ -1.91
H3BM21 RNU7-85P-201ENST00000458851 63 ntBASIC3.13□□□□□ -1.91
H3BM21 RNU7-48P-201ENST00000458875 63 ntBASIC3.13□□□□□ -1.91
H3BM21 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
H3BM21 RNA5SP385-201ENST00000515947 110 ntBASIC3.13□□□□□ -1.91
H3BM21 RNU7-156P-201ENST00000517214 74 ntBASIC3.13□□□□□ -1.91
H3BM21 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
H3BM21 AC005520.4-201ENST00000604337 90 ntBASIC3.13□□□□□ -1.91
H3BM21 AL512598.1-201ENST00000610158 273 ntBASIC3.13□□□□□ -1.91
H3BM21 U6.59-201ENST00000615686 107 ntBASIC3.13□□□□□ -1.91
H3BM21 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.13□□□□□ -1.91
H3BM21 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H3BM21 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
H3BM21 RNU6-1083P-201ENST00000384022 107 ntBASIC3.12□□□□□ -1.91
H3BM21 SNORA7.4-201ENST00000384249 137 ntBASIC3.12□□□□□ -1.91
H3BM21 MIR154-201ENST00000385243 84 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-447P-201ENST00000410293 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-1118P-201ENST00000410382 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-1076P-201ENST00000410397 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-355P-201ENST00000410427 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-791P-201ENST00000410467 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-705P-201ENST00000410601 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-1100P-201ENST00000410691 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-860P-201ENST00000410860 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-1086P-201ENST00000410930 100 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-602P-201ENST00000411155 105 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-1217P-201ENST00000411276 104 ntBASIC3.12□□□□□ -1.91
H3BM21 RNU6-785P-201ENST00000411324 104 ntBASIC3.12□□□□□ -1.91
H3BM21 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.12□□□□□ -1.91
H3BM21 U6.90-201ENST00000614007 104 ntBASIC3.12□□□□□ -1.91
H3BM21 U6.70-201ENST00000620287 104 ntBASIC3.12□□□□□ -1.91
H3BM21 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.12□□□□□ -1.91
H3BM21 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
H3BM21 AC245060.5-201ENST00000610778 3293 ntBASIC3.11□□□□□ -1.91
H3BM21 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
H3BM21 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
H3BM21 Y_RNA.98-201ENST00000363109 102 ntBASIC3.11□□□□□ -1.91
H3BM21 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
H3BM21 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
H3BM21 MIR520H-201ENST00000385126 88 ntBASIC3.11□□□□□ -1.91
H3BM21 SNORD77.2-201ENST00000391045 68 ntBASIC3.11□□□□□ -1.91
H3BM21 STAG3L5P-204ENST00000443759 179 ntBASIC3.11□□□□□ -1.91
H3BM21 MIR8066-201ENST00000617280 78 ntBASIC3.11□□□□□ -1.91
H3BM21 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.11□□□□□ -1.91
H3BM21 AC006386.2-201ENST00000624491 75 ntBASIC3.11□□□□□ -1.91
H3BM21 AC012005.1-201ENST00000624575 75 ntBASIC3.11□□□□□ -1.91
H3BM21 AP001362.1-201ENST00000625165 124 ntBASIC3.11□□□□□ -1.91
H3BM21 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.11□□□□□ -1.91
H3BM21 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
H3BM21 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
H3BM21 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
H3BM21 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
H3BM21 SNORD114-10-201ENST00000363409 72 ntBASIC3.1□□□□□ -1.91
H3BM21 SNORA71.1-201ENST00000364523 117 ntBASIC3.1□□□□□ -1.91
H3BM21 SNORA24-201ENST00000384096 131 ntBASIC3.1□□□□□ -1.91
H3BM21 AL606517.2-201ENST00000442855 241 ntBASIC3.1□□□□□ -1.91
H3BM21 ATP5J2P3-201ENST00000451550 258 ntBASIC3.1□□□□□ -1.91
H3BM21 RNU7-73P-201ENST00000458743 63 ntBASIC3.1□□□□□ -1.91
H3BM21 RNA5SP217-201ENST00000515959 91 ntBASIC3.1□□□□□ -1.91
H3BM21 RNU7-137P-201ENST00000516788 62 ntBASIC3.1□□□□□ -1.91
H3BM21 RNU6-303P-201ENST00000517091 106 ntBASIC3.1□□□□□ -1.91
H3BM21 SCARNA20.6-201ENST00000517251 106 ntBASIC3.1□□□□□ -1.91
H3BM21 UBL5P2-201ENST00000583788 219 ntBASIC3.1□□□□□ -1.91
H3BM21 AC027279.3-201ENST00000625055 122 ntBASIC3.1□□□□□ -1.91
H3BM21 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
H3BM21 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
H3BM21 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
H3BM21 MIRLET7C-201ENST00000362160 84 ntBASIC3.09□□□□□ -1.91
H3BM21 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
H3BM21 RNU1-23P-201ENST00000363361 144 ntBASIC3.09□□□□□ -1.91
H3BM21 MIR887-201ENST00000401258 79 ntBASIC3.09□□□□□ -1.91
H3BM21 AC074348.1-201ENST00000426503 132 ntBASIC3.09□□□□□ -1.91
H3BM21 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
H3BM21 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.09□□□□□ -1.91
H3BM21 RNU7-79P-201ENST00000516082 62 ntBASIC3.09□□□□□ -1.91
H3BM21 SCARNA17.1-201ENST00000516211 143 ntBASIC3.09□□□□□ -1.91
H3BM21 SCARNA17.2-201ENST00000516334 143 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms