Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 SNORD115-28-201ENST00000363931 81 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.292-201ENST00000364904 97 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.304-201ENST00000365011 112 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 SNORD12-201ENST00000391002 90 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 MIR4662B-201ENST00000579498 81 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 MIR548AO-201ENST00000579992 96 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 AL442067.1-201ENST00000613261 223 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 MIR6504-201ENST00000613520 61 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 SEPT14P17-201ENST00000617978 177 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 AC243994.1-201ENST00000618627 109 ntBASIC0.9□□□□□ -2.27
NKX6-3A6NJ46 AL391516.1-201ENST00000554380 2449 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.518-201ENST00000384552 113 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR518F-201ENST00000384973 87 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 RNU6-493P-201ENST00000391321 108 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR1287-201ENST00000408492 90 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR548H3-201ENST00000408771 118 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR1302-7-201ENST00000408841 72 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 RNU6-847P-201ENST00000411115 108 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MTND3P2-201ENST00000438452 342 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 SNRPGP8-201ENST00000454064 226 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 RNU7-67P-201ENST00000459003 62 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 RPS23P4-201ENST00000487908 423 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 UBL5P1-201ENST00000507979 193 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 RNU6-561P-201ENST00000516222 102 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 SNORD36C-201ENST00000516733 66 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 AP003716.2-201ENST00000528260 108 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR5688-201ENST00000580619 83 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR4282-201ENST00000583613 67 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 AC103810.9-201ENST00000606688 112 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 MIR6516-201ENST00000630554 81 ntBASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
NKX6-3A6NJ46 AL442644.1-201ENST00000454390 3105 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU6-653P-201ENST00000363074 106 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU1-124P-201ENST00000363861 145 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.262-201ENST00000364641 102 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.269-201ENST00000364685 89 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU6-923P-201ENST00000364753 107 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.308-201ENST00000365043 101 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU4-17P-201ENST00000365598 141 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.432-201ENST00000384087 111 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 MIR616-201ENST00000385293 97 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU6-381P-201ENST00000391259 108 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 AC107297.1-201ENST00000459991 176 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU6-958P-201ENST00000516995 106 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 AC131055.1-201ENST00000584626 316 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 RNU6-94P-201ENST00000607728 107 ntBASIC0.88□□□□□ -2.27
NKX6-3A6NJ46 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.37-201ENST00000362606 108 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 SNORD45.3-201ENST00000363836 72 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.634-201ENST00000364811 113 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.537-201ENST00000384626 109 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.556-201ENST00000384677 113 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 MIR19B1-201ENST00000384829 87 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 MIR548A2-201ENST00000384956 97 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 AL138752.1-201ENST00000452964 351 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 MTND1P19-201ENST00000511780 315 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 RNU6-504P-201ENST00000516568 104 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 AP003484.1-201ENST00000530974 250 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 MIR3128-201ENST00000581957 66 ntBASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
NKX6-3A6NJ46 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 MIR342-201ENST00000362212 99 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 RNU6-484P-201ENST00000384016 107 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 RNU6-196P-201ENST00000384315 107 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 SNORA2B-201ENST00000384583 137 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 RNU6-938P-201ENST00000411285 103 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 AF228730.3-201ENST00000436691 102 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.668-201ENST00000516233 93 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 SNORA18.4-201ENST00000516440 124 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.680-201ENST00000516441 93 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 MIR4503-201ENST00000582187 83 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 AC011921.3-201ENST00000605540 361 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 AC062037.2-201ENST00000610137 73 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 U4.1-201ENST00000620349 87 ntBASIC0.86□□□□□ -2.27
NKX6-3A6NJ46 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.350-201ENST00000365409 98 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 SNORD24-201ENST00000383884 75 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.539-201ENST00000384635 107 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.562-201ENST00000384695 113 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 RNU6-205P-201ENST00000390858 107 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 RNU6-994P-201ENST00000410507 111 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 AL392103.1-201ENST00000447000 198 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 RNU2-4P-201ENST00000606190 192 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 AC134878.1-201ENST00000619901 243 ntBASIC0.85□□□□□ -2.27
NKX6-3A6NJ46 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.84□□□□□ -2.27
NKX6-3A6NJ46 Y_RNA.7-201ENST00000362352 102 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms