Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
CTAGE9A4FU28 RNU6-888P-201ENST00000363010 101 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 RNU6-682P-201ENST00000363843 106 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 SNORD115-28-201ENST00000363931 81 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 SNORA1.2-201ENST00000365189 134 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 Y_RNA.547-201ENST00000384654 119 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 MIR1285-1-201ENST00000408593 84 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 AC004223.1-201ENST00000479840 271 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 AC005840.1-201ENST00000498412 377 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 AC108729.3-201ENST00000513484 108 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 AC097639.2-201ENST00000603159 172 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 AL357312.1-201ENST00000603879 298 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 GHRLOS.1-201ENST00000610995 70 ntBASIC1.3□□□□□ -2.2
CTAGE9A4FU28 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CTAGE9A4FU28 Y_RNA.66-201ENST00000362862 102 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 Y_RNA.337-201ENST00000365312 102 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 RNU6-907P-201ENST00000390924 102 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 U8.17-201ENST00000391292 132 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 SNORD123-201ENST00000459473 70 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 AC107297.1-201ENST00000459991 176 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.29□□□□□ -2.2
CTAGE9A4FU28 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 SNORA74.3-201ENST00000517108 154 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 AC134878.1-201ENST00000619901 243 ntBASIC1.29□□□□□ -2.2
CTAGE9A4FU28 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.29□□□□□ -2.2
CTAGE9A4FU28 MIR337-201ENST00000362281 93 ntBASIC1.28□□□□□ -2.2
CTAGE9A4FU28 Y_RNA.150-201ENST00000363562 102 ntBASIC1.28□□□□□ -2.2
CTAGE9A4FU28 MIR520C-201ENST00000385005 87 ntBASIC1.28□□□□□ -2.2
CTAGE9A4FU28 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.28□□□□□ -2.2
CTAGE9A4FU28 AC087499.4-201ENST00000448505 178 ntBASIC1.28□□□□□ -2.2
CTAGE9A4FU28 RNU7-95P-201ENST00000459222 64 ntBASIC1.28□□□□□ -2.2
CTAGE9A4FU28 FTX_2.1-201ENST00000618816 94 ntBASIC1.28□□□□□ -2.2
CTAGE9A4FU28 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CTAGE9A4FU28 SNORA25.7-201ENST00000364375 127 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 MIR518F-201ENST00000384973 87 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 RNU6-239P-201ENST00000390990 99 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.27□□□□□ -2.21
CTAGE9A4FU28 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 AL603825.1-201ENST00000438481 80 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 RPL39P39-201ENST00000455840 151 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 RNU7-181P-201ENST00000517234 74 ntBASIC1.27□□□□□ -2.21
CTAGE9A4FU28 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CTAGE9A4FU28 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.37-201ENST00000362606 108 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 RNU4-84P-201ENST00000364200 139 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.241-201ENST00000364470 117 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.370-201ENST00000365589 108 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.410-201ENST00000383992 113 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.542-201ENST00000384641 111 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 AC074198.2-201ENST00000508153 258 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 RNU4-57P-201ENST00000515980 135 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 SNORA18.4-201ENST00000516440 124 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 AC007751.1-201ENST00000529260 376 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 CYP3A52P-201ENST00000563326 91 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 MIR4421-201ENST00000578133 69 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 MIR3129-201ENST00000581095 76 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 AP000942.3-201ENST00000603702 160 ntBASIC1.26□□□□□ -2.21
CTAGE9A4FU28 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.26□□□□□ -2.21
CTAGE9A4FU28 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CTAGE9A4FU28 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 RNA5SP327-201ENST00000362494 101 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 SNORA1-201ENST00000384107 130 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 RNU6-886P-201ENST00000384319 105 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.555-201ENST00000384673 110 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 MIR548A2-201ENST00000384956 97 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 SNORD41-201ENST00000386967 70 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 RNA5SP247-201ENST00000411181 105 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 BTF3P4-201ENST00000418852 495 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AF228730.3-201ENST00000436691 102 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 RNU6-1053P-201ENST00000515930 101 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AP003484.1-201ENST00000530974 250 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 MIR3664-201ENST00000579074 99 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 MIR548AR-201ENST00000582191 57 ntBASIC1.25□□□□□ -2.21
CTAGE9A4FU28 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CTAGE9A4FU28 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CTAGE9A4FU28 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CTAGE9A4FU28 RNU6-978P-201ENST00000364371 103 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.272-201ENST00000364696 102 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 RNU6-1189P-201ENST00000383958 107 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 Y_RNA.441-201ENST00000384123 112 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CTAGE9A4FU28 SNORD37.2-201ENST00000391075 66 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 RNU6-1135P-201ENST00000411083 103 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.24□□□□□ -2.21
CTAGE9A4FU28 AP1B1P2-201ENST00000416196 106 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 SNORD111.1-201ENST00000516421 86 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
CTAGE9A4FU28 AL512310.8-201ENST00000550183 120 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms