Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MIR4791-201ENST00000607666 84 ntBASIC2.39□□□□□ -2.03
U3KQE9 SNORD38.1-201ENST00000363863 68 ntBASIC2.38□□□□□ -2.03
U3KQE9 RNU6-219P-201ENST00000364728 107 ntBASIC2.38□□□□□ -2.03
U3KQE9 Y_RNA.426-201ENST00000384068 113 ntBASIC2.38□□□□□ -2.03
U3KQE9 RNU6-402P-201ENST00000410678 103 ntBASIC2.38□□□□□ -2.03
U3KQE9 AL445685.2-201ENST00000422551 342 ntBASIC2.38□□□□□ -2.03
U3KQE9 RNA5SP385-201ENST00000515947 110 ntBASIC2.38□□□□□ -2.03
U3KQE9 RNU7-2P-201ENST00000516096 62 ntBASIC2.38□□□□□ -2.03
U3KQE9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.38□□□□□ -2.03
U3KQE9 SNORA31.26-201ENST00000517250 137 ntBASIC2.38□□□□□ -2.03
U3KQE9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.38□□□□□ -2.03
U3KQE9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.38□□□□□ -2.03
U3KQE9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
U3KQE9 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
U3KQE9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.37□□□□□ -2.03
U3KQE9 AL035425.3-201ENST00000564206 4996 ntBASIC2.37□□□□□ -2.03
U3KQE9 RNU6-497P-201ENST00000365316 104 ntBASIC2.37□□□□□ -2.03
U3KQE9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
U3KQE9 RNU11-3P-201ENST00000391111 133 ntBASIC2.37□□□□□ -2.03
U3KQE9 MIR1283-2-201ENST00000408621 87 ntBASIC2.37□□□□□ -2.03
U3KQE9 Y_RNA.620-201ENST00000411009 88 ntBASIC2.37□□□□□ -2.03
U3KQE9 AC005326.1-201ENST00000429197 123 ntBASIC2.37□□□□□ -2.03
U3KQE9 Z96811.1-201ENST00000445880 108 ntBASIC2.37□□□□□ -2.03
U3KQE9 UQCRHP3-201ENST00000451503 251 ntBASIC2.37□□□□□ -2.03
U3KQE9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
U3KQE9 MIR4709-201ENST00000577272 72 ntBASIC2.37□□□□□ -2.03
U3KQE9 MIR4444-1-201ENST00000581696 74 ntBASIC2.37□□□□□ -2.03
U3KQE9 MIR4444-2-201ENST00000584390 74 ntBASIC2.37□□□□□ -2.03
U3KQE9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.36□□□□□ -2.03
U3KQE9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
U3KQE9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
U3KQE9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.36□□□□□ -2.03
U3KQE9 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
U3KQE9 SNORD58A-201ENST00000383875 65 ntBASIC2.36□□□□□ -2.03
U3KQE9 Y_RNA.467-201ENST00000384297 102 ntBASIC2.36□□□□□ -2.03
U3KQE9 SNORD15B-201ENST00000384714 146 ntBASIC2.36□□□□□ -2.03
U3KQE9 RNU6-913P-201ENST00000390913 95 ntBASIC2.36□□□□□ -2.03
U3KQE9 U8.15-201ENST00000390947 134 ntBASIC2.36□□□□□ -2.03
U3KQE9 MIR1255A-201ENST00000408338 113 ntBASIC2.36□□□□□ -2.03
U3KQE9 RNU2-7P-201ENST00000410794 178 ntBASIC2.36□□□□□ -2.03
U3KQE9 AC090844.1-201ENST00000422019 156 ntBASIC2.36□□□□□ -2.03
U3KQE9 RN7SL863P-201ENST00000462370 296 ntBASIC2.36□□□□□ -2.03
U3KQE9 SUB1P4-201ENST00000566062 339 ntBASIC2.36□□□□□ -2.03
U3KQE9 MIR548AR-201ENST00000582191 57 ntBASIC2.36□□□□□ -2.03
U3KQE9 MIR4668-201ENST00000582284 70 ntBASIC2.36□□□□□ -2.03
U3KQE9 AC008739.3-201ENST00000603262 127 ntBASIC2.36□□□□□ -2.03
U3KQE9 AC021506.2-201ENST00000612354 169 ntBASIC2.36□□□□□ -2.03
U3KQE9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
U3KQE9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
U3KQE9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
U3KQE9 AC093831.2-201ENST00000624393 3427 ntBASIC2.36□□□□□ -2.03
U3KQE9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.35□□□□□ -2.03
U3KQE9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
U3KQE9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.35□□□□□ -2.03
U3KQE9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
U3KQE9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-447P-201ENST00000410293 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-1118P-201ENST00000410382 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-1076P-201ENST00000410397 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-355P-201ENST00000410427 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-791P-201ENST00000410467 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-705P-201ENST00000410601 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-1100P-201ENST00000410691 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-860P-201ENST00000410860 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNA5SP225-201ENST00000410874 135 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-1217P-201ENST00000411276 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-785P-201ENST00000411324 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.35□□□□□ -2.03
U3KQE9 RNU7-26P-201ENST00000458980 63 ntBASIC2.35□□□□□ -2.03
U3KQE9 snoU13.27-201ENST00000459278 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 RN7SL75P-201ENST00000461926 281 ntBASIC2.35□□□□□ -2.03
U3KQE9 RN7SL20P-201ENST00000488827 297 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU7-43P-201ENST00000516554 64 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU6-56P-201ENST00000516986 93 ntBASIC2.35□□□□□ -2.03
U3KQE9 RNU7-35P-201ENST00000517174 62 ntBASIC2.35□□□□□ -2.03
U3KQE9 MIR4506-201ENST00000584693 77 ntBASIC2.35□□□□□ -2.03
U3KQE9 RPL12P50-201ENST00000603116 116 ntBASIC2.35□□□□□ -2.03
U3KQE9 U6.90-201ENST00000614007 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.35□□□□□ -2.03
U3KQE9 U6.70-201ENST00000620287 104 ntBASIC2.35□□□□□ -2.03
U3KQE9 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.35□□□□□ -2.03
U3KQE9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
U3KQE9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
U3KQE9 AC073325.2-201ENST00000339545 159 ntBASIC2.34□□□□□ -2.03
U3KQE9 MIR424-201ENST00000362227 98 ntBASIC2.34□□□□□ -2.03
U3KQE9 Y_RNA.73-201ENST00000362910 113 ntBASIC2.34□□□□□ -2.03
U3KQE9 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
U3KQE9 Y_RNA.190-201ENST00000363964 101 ntBASIC2.34□□□□□ -2.03
U3KQE9 RNU6-1296P-201ENST00000383879 107 ntBASIC2.34□□□□□ -2.03
U3KQE9 MIR597-201ENST00000384968 97 ntBASIC2.34□□□□□ -2.03
U3KQE9 RNA5SP274-201ENST00000410484 108 ntBASIC2.34□□□□□ -2.03
U3KQE9 RNA5SP120-201ENST00000410900 112 ntBASIC2.34□□□□□ -2.03
U3KQE9 AC092017.2-201ENST00000427600 362 ntBASIC2.34□□□□□ -2.03
U3KQE9 RNU6-1006P-201ENST00000516998 103 ntBASIC2.34□□□□□ -2.03
U3KQE9 SNORA74.3-201ENST00000517108 154 ntBASIC2.34□□□□□ -2.03
U3KQE9 MIR5680-201ENST00000577577 84 ntBASIC2.34□□□□□ -2.03
U3KQE9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.34□□□□□ -2.03
U3KQE9 MIR5195-201ENST00000583555 115 ntBASIC2.34□□□□□ -2.03
U3KQE9 UBL5P2-201ENST00000583788 219 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms