Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 RNU6-449P-201ENST00000383914 107 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-768P-201ENST00000384683 107 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 snoU13.23-201ENST00000458863 104 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 AC008834.1-201ENST00000511612 175 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 AC134878.1-201ENST00000619901 243 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 MTND1P7-201ENST00000632801 297 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 AC021753.1-201ENST00000635724 168 ntBASIC1.82□□□□□ -2.12
PCDHA3Q9Y5H8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-1292P-201ENST00000383856 107 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 MIR516B2-201ENST00000385190 85 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 AL591806.2-201ENST00000433122 173 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 AC087499.4-201ENST00000448505 178 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 AC005908.1-201ENST00000468701 347 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 RNU4-57P-201ENST00000515980 135 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-917P-201ENST00000516294 104 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-255P-201ENST00000516957 105 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 AC015726.2-201ENST00000620112 122 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 AC106754.2-201ENST00000623006 233 ntBASIC1.81□□□□□ -2.12
PCDHA3Q9Y5H8 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 SNORD115-28-201ENST00000363931 81 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 Y_RNA.398-201ENST00000383952 99 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 Y_RNA.410-201ENST00000383992 113 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 SNORA1-201ENST00000384107 130 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-322P-201ENST00000516010 103 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 FAM106DP-201ENST00000586416 501 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 AL513534.2-201ENST00000603836 250 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 MIR6844-201ENST00000637122 62 ntBASIC1.8□□□□□ -2.12
PCDHA3Q9Y5H8 Y_RNA.170-201ENST00000363746 110 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 SNORD1A-201ENST00000364968 72 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-1130P-201ENST00000365434 107 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 SNORA75.5-201ENST00000391291 81 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-295P-201ENST00000516901 104 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 RNU6-548P-201ENST00000517083 115 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 Y_RNA.778-201ENST00000620203 90 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PCDHA3Q9Y5H8 Y_RNA.8-201ENST00000362353 102 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 Y_RNA.37-201ENST00000362606 108 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 RNY1P5-201ENST00000383890 115 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 SNORD116-18-201ENST00000383961 92 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 MIR624-201ENST00000385217 97 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 U8.17-201ENST00000391292 132 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 AF228730.3-201ENST00000436691 102 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 AC092991.1-201ENST00000477176 376 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 MTND5P41-201ENST00000517498 206 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
PCDHA3Q9Y5H8 U8.13-201ENST00000390842 128 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD77.3-201ENST00000391113 65 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 RNU1-78P-201ENST00000391248 165 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 RNA5SP127-201ENST00000411051 133 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-938P-201ENST00000411285 103 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 AC079140.2-201ENST00000506193 142 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 RNU7-200P-201ENST00000516105 62 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-250P-201ENST00000516958 103 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 AC015712.3-201ENST00000559380 164 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 MIR3129-201ENST00000581095 76 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 MIR8063-201ENST00000621930 81 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 MIR3658-201ENST00000636291 56 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 WWP1P1-201ENST00000466609 2769 ntBASIC1.77□□□□□ -2.13
PCDHA3Q9Y5H8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-151P-201ENST00000364158 107 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 SNORA1.2-201ENST00000365189 134 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 Y_RNA.400-201ENST00000383963 111 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 SNORA40.18-201ENST00000391200 128 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 AL451046.2-201ENST00000403074 277 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 SNORD123-201ENST00000459473 70 ntBASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.76□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-1082P-201ENST00000364574 107 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-1189P-201ENST00000383958 107 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 MIR764-201ENST00000390811 85 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AC027119.1-201ENST00000440877 241 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 RNU6-237P-201ENST00000515985 71 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 SNORA18.4-201ENST00000516440 124 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 SNORA18.7-201ENST00000516910 131 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AP003484.1-201ENST00000530974 250 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 MIR4769-201ENST00000584126 77 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AL365434.2-201ENST00000607979 234 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AC084768.2-201ENST00000622736 221 ntBASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
PCDHA3Q9Y5H8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 RNA5SP432-201ENST00000362480 116 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 RNA5SP363-201ENST00000365072 115 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 Y_RNA.506-201ENST00000384494 102 ntBASIC1.74□□□□□ -2.13
PCDHA3Q9Y5H8 SNORA40.5-201ENST00000391061 128 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms