Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 CYCSP49-201ENST00000420810 319 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 AC012493.3-201ENST00000604494 112 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
PCDHGA9Q9Y5G4 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 RNU6-597P-201ENST00000365620 102 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 Y_RNA.464-201ENST00000384282 110 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR516B2-201ENST00000385190 85 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 AC107297.1-201ENST00000459991 176 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 RPL30P7-201ENST00000479312 323 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR3646-201ENST00000578301 84 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 MIR3935-201ENST00000583472 104 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PCDHGA9Q9Y5G4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
PCDHGA9Q9Y5G4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
PCDHGA9Q9Y5G4 Y_RNA.150-201ENST00000363562 102 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-1292P-201ENST00000383856 107 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR526A1-201ENST00000384897 85 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 RPL31P63-201ENST00000422565 375 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 AC092991.1-201ENST00000477176 376 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-917P-201ENST00000516294 104 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU7-25P-201ENST00000516544 62 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU7-121P-201ENST00000516604 62 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORA74.3-201ENST00000517108 154 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR4498-201ENST00000577599 66 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
PCDHGA9Q9Y5G4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-978P-201ENST00000364371 103 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 Y_RNA.272-201ENST00000364696 102 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 Y_RNA.393-201ENST00000383936 102 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 U8.17-201ENST00000391292 132 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 RNA5SP247-201ENST00000411181 105 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU7-43P-201ENST00000516554 64 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 AL365205.2-201ENST00000594586 68 ntBASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHGA9Q9Y5G4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-209P-201ENST00000384118 107 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR518F-201ENST00000384973 87 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 Y_RNA.580-201ENST00000391004 95 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 RN7SL274P-201ENST00000492268 272 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 AC108729.3-201ENST00000513484 108 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 DNAJC19P2-201ENST00000593340 302 ntBASIC1.81□□□□□ -2.12
PCDHGA9Q9Y5G4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 Y_RNA.4-201ENST00000362333 112 ntBASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD123-201ENST00000459473 70 ntBASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU4-57P-201ENST00000515980 135 ntBASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 AL365434.2-201ENST00000607979 234 ntBASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 MTND1P7-201ENST00000632801 297 ntBASIC1.8□□□□□ -2.12
PCDHGA9Q9Y5G4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-449P-201ENST00000383914 107 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORA40.5-201ENST00000391061 128 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 PCNPP3-201ENST00000393579 471 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 AL627390.1-201ENST00000396055 340 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR548I3-201ENST00000408378 149 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR548I1-201ENST00000408810 149 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 RNU6-394P-201ENST00000410735 107 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 RPL39P39-201ENST00000455840 151 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORA18.4-201ENST00000516440 124 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORA18.7-201ENST00000516910 131 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR3683-201ENST00000580847 82 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 MIR6844-201ENST00000637122 62 ntBASIC1.79□□□□□ -2.12
PCDHGA9Q9Y5G4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-34-201ENST00000362441 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-12-201ENST00000362583 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-29-201ENST00000362834 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-9-201ENST00000362912 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-21-201ENST00000362963 81 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-14-201ENST00000363090 81 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-13-201ENST00000363358 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-41-201ENST00000363608 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-11-201ENST00000363616 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-5-201ENST00000363633 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-39-201ENST00000363694 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-4-201ENST00000363810 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-16-201ENST00000363887 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-6-201ENST00000363942 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-42-201ENST00000364273 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-15-201ENST00000364809 81 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-1-201ENST00000364961 82 ntBASIC1.78□□□□□ -2.12
PCDHGA9Q9Y5G4 SNORD115-26-201ENST00000365067 82 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms