Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RNU6-1138P-201ENST00000365359 106 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 SNORD38C-201ENST00000384381 69 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 Y_RNA.489-201ENST00000384410 101 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 MIR616-201ENST00000385293 97 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 RNU6-381P-201ENST00000391259 108 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 RNU6-493P-201ENST00000391321 108 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 AL606845.1-201ENST00000404881 255 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 Y_RNA.618-201ENST00000410949 107 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 COX6CP14-201ENST00000469580 174 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 RNU6-165P-201ENST00000517170 99 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 AC006441.5-201ENST00000612680 209 ntBASIC1.28□□□□□ -2.2
YIPF1Q9Y548 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
YIPF1Q9Y548 RNU4-17P-201ENST00000365598 141 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.622-201ENST00000411091 108 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
YIPF1Q9Y548 SNRPGP8-201ENST00000454064 226 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 RPL30P7-201ENST00000479312 323 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 RN7SKP164-201ENST00000516138 266 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.666-201ENST00000516187 112 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 RN7SKP88-201ENST00000516847 250 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 7SK.8-201ENST00000612110 250 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 7SK.11-201ENST00000615477 250 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 7SK.13-201ENST00000622040 250 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.27□□□□□ -2.21
YIPF1Q9Y548 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
YIPF1Q9Y548 RNU6-379P-201ENST00000363813 104 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.199-201ENST00000364014 102 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 RNY1-201ENST00000364228 113 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.242-201ENST00000364473 110 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 RNU6-561P-201ENST00000516222 102 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 SNORA74.3-201ENST00000517108 154 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 MIR7974-201ENST00000615835 79 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 AC015726.2-201ENST00000620112 122 ntBASIC1.26□□□□□ -2.21
YIPF1Q9Y548 MIR96-201ENST00000362288 78 ntBASIC1.25□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.191-201ENST00000363972 113 ntBASIC1.25□□□□□ -2.21
YIPF1Q9Y548 RNU6-1228P-201ENST00000391014 107 ntBASIC1.25□□□□□ -2.21
YIPF1Q9Y548 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.25□□□□□ -2.21
YIPF1Q9Y548 SNORD123-201ENST00000459473 70 ntBASIC1.25□□□□□ -2.21
YIPF1Q9Y548 MIR4662B-201ENST00000579498 81 ntBASIC1.25□□□□□ -2.21
YIPF1Q9Y548 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.24□□□□□ -2.21
YIPF1Q9Y548 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.116-201ENST00000363292 103 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNY3P5-201ENST00000384127 102 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNU6-1299P-201ENST00000516316 100 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNU6-830P-201ENST00000516353 107 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNU7-25P-201ENST00000516544 62 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNU6-388P-201ENST00000517012 105 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNU6-389P-201ENST00000517048 105 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 MIR4308-201ENST00000580634 81 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 MIR548AR-201ENST00000582191 57 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 AL357312.1-201ENST00000603879 298 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 RNU2-4P-201ENST00000606190 192 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 AL096861.1-201ENST00000610899 123 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 AL391903.3-201ENST00000612158 163 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 AC078938.1-201ENST00000620993 318 ntBASIC1.24□□□□□ -2.21
YIPF1Q9Y548 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
YIPF1Q9Y548 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.200-201ENST00000364018 102 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.476-201ENST00000384347 108 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.508-201ENST00000384502 114 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.547-201ENST00000384654 119 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 MIR520C-201ENST00000385005 87 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 MT-TG-201ENST00000387429 68 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 SNORD28B-201ENST00000390993 75 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 U8.17-201ENST00000391292 132 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 MIR548O-201ENST00000408583 114 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.23□□□□□ -2.21
YIPF1Q9Y548 RNU7-181P-201ENST00000517234 74 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 AL160236.1-201ENST00000556317 195 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 MIR4452-201ENST00000583004 71 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 MIR3192-201ENST00000584920 77 ntBASIC1.23□□□□□ -2.21
YIPF1Q9Y548 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.23□□□□□ -2.21
YIPF1Q9Y548 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
YIPF1Q9Y548 Y_RNA.91-201ENST00000363042 107 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 SNORD114-27-201ENST00000363766 70 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 SNORD45.3-201ENST00000363836 72 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 RNU6-484P-201ENST00000384016 107 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 SNORD61-201ENST00000384252 73 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 MIR15B-201ENST00000385045 98 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 RNU2-55P-201ENST00000411146 174 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 RNU6-693P-201ENST00000516134 107 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 SNORD111.1-201ENST00000516421 86 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 RNU6-365P-201ENST00000517113 106 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 AC007751.1-201ENST00000529260 376 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
YIPF1Q9Y548 AC130289.1-201ENST00000577321 73 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 MIR4764-201ENST00000580680 88 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 MIR4744-201ENST00000581563 82 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 AC009779.6-201ENST00000603972 165 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 MIR8065-201ENST00000620577 100 ntBASIC1.22□□□□□ -2.21
YIPF1Q9Y548 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
YIPF1Q9Y548 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
YIPF1Q9Y548 Y_RNA.7-201ENST00000362352 102 ntBASIC1.21□□□□□ -2.22
YIPF1Q9Y548 Y_RNA.83-201ENST00000363005 113 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms