Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SNORA67.6-201ENST00000391093 99 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.53□□□□□ -2.16
PKP3Q9Y446 RNU6-693P-201ENST00000516134 107 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 RNU7-25P-201ENST00000516544 62 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 RNU6-922P-201ENST00000516753 99 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 MIR4431-201ENST00000579990 94 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 AL513534.2-201ENST00000603836 250 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 AC098479.1-201ENST00000609225 154 ntBASIC1.53□□□□□ -2.16
PKP3Q9Y446 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.52□□□□□ -2.17
PKP3Q9Y446 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PKP3Q9Y446 Y_RNA.66-201ENST00000362862 102 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 RNU6-888P-201ENST00000363010 101 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 Y_RNA.270-201ENST00000364693 104 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 SNORD61-201ENST00000384252 73 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 MIR1304-201ENST00000408243 91 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 AC006461.1-201ENST00000412637 326 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 SEPT7P4-201ENST00000437076 306 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 AC027119.1-201ENST00000440877 241 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 RNU6-830P-201ENST00000516353 107 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 RNU6-1270P-201ENST00000517128 108 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 AC015712.3-201ENST00000559380 164 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 AC104984.5-201ENST00000586878 94 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 FTX_2.1-201ENST00000618816 94 ntBASIC1.52□□□□□ -2.17
PKP3Q9Y446 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PKP3Q9Y446 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PKP3Q9Y446 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
PKP3Q9Y446 RNU1-17P-201ENST00000363022 152 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 Y_RNA.357-201ENST00000365487 109 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 Y_RNA.547-201ENST00000384654 119 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.51□□□□□ -2.17
PKP3Q9Y446 AC107027.2-201ENST00000512197 115 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 RNA5SP445-201ENST00000515889 115 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 SNORA18.7-201ENST00000516910 131 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 MIR378D2-201ENST00000580636 98 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 AL442644.1-201ENST00000454390 3105 ntBASIC1.51□□□□□ -2.17
PKP3Q9Y446 MIR518F-201ENST00000384973 87 ntBASIC1.5□□□□□ -2.17
PKP3Q9Y446 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
PKP3Q9Y446 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
PKP3Q9Y446 AC005840.1-201ENST00000498412 377 ntBASIC1.5□□□□□ -2.17
PKP3Q9Y446 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
PKP3Q9Y446 SNORD116-25-201ENST00000516517 92 ntBASIC1.5□□□□□ -2.17
PKP3Q9Y446 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
PKP3Q9Y446 Y_RNA.150-201ENST00000363562 102 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 SNORD115-28-201ENST00000363931 81 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 MIR548A2-201ENST00000384956 97 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 SNORD41-201ENST00000386967 70 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 SNORD123-201ENST00000459473 70 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 SNORA74.3-201ENST00000517108 154 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 AC007751.1-201ENST00000529260 376 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 AL357312.1-201ENST00000603879 298 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 GHRLOS.1-201ENST00000610995 70 ntBASIC1.49□□□□□ -2.17
PKP3Q9Y446 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 Y_RNA.521-201ENST00000384560 114 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 U8.17-201ENST00000391292 132 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 AC074198.2-201ENST00000508153 258 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 RNU4-57P-201ENST00000515980 135 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.48□□□□□ -2.17
PKP3Q9Y446 AL353997.5-201ENST00000618886 171 ntBASIC1.48□□□□□ -2.17
PKP3Q9Y446 RNU6-978P-201ENST00000364371 103 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 Y_RNA.555-201ENST00000384673 110 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 RNU5E-9P-201ENST00000411164 104 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 AC087499.4-201ENST00000448505 178 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 SNORD111.1-201ENST00000516421 86 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 RNU7-181P-201ENST00000517234 74 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 MIR4524B-201ENST00000581569 115 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 AC134878.1-201ENST00000619901 243 ntBASIC1.47□□□□□ -2.17
PKP3Q9Y446 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
PKP3Q9Y446 RNU4-84P-201ENST00000364200 139 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 SNORA1.2-201ENST00000365189 134 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 Y_RNA.337-201ENST00000365312 102 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 RNU6-886P-201ENST00000384319 105 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 Y_RNA.542-201ENST00000384641 111 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 RNU6-239P-201ENST00000390990 99 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.46□□□□□ -2.18
PKP3Q9Y446 RNU7-43P-201ENST00000516554 64 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 AL512310.8-201ENST00000550183 120 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 AL645939.4-201ENST00000604495 135 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 AL121890.5-201ENST00000620848 304 ntBASIC1.46□□□□□ -2.18
PKP3Q9Y446 Y_RNA.37-201ENST00000362606 108 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 SNORA1-201ENST00000384107 130 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 Y_RNA.441-201ENST00000384123 112 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 MIR520C-201ENST00000385005 87 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 PCNPP3-201ENST00000393579 471 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.45□□□□□ -2.18
PKP3Q9Y446 RPL39P39-201ENST00000455840 151 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 AL365205.2-201ENST00000594586 68 ntBASIC1.45□□□□□ -2.18
PKP3Q9Y446 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
PKP3Q9Y446 SNORA25.7-201ENST00000364375 127 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms