Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 SNORD115-26-201ENST00000365067 82 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 SNORD115-10-201ENST00000365073 81 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 SNORD115-43-201ENST00000365503 82 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 SNORD115-36-201ENST00000365629 82 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 Y_RNA.470-201ENST00000384307 117 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-424P-201ENST00000384367 105 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-813P-201ENST00000384691 107 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 RNA5SP492-201ENST00000411330 114 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 AC096949.1-201ENST00000412047 152 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 IGLV3-17-201ENST00000519099 244 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 MIR548AE2-201ENST00000583456 67 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 AP000648.3-201ENST00000623539 4507 ntBASIC2.7□□□□□ -1.98
HIF3AQ9Y2N7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 AC009487.2-201ENST00000420969 6821 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 SNORD45B-201ENST00000364617 72 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 RNU1-91P-201ENST00000364746 163 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 SNORA54-201ENST00000384281 123 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 MIR516B2-201ENST00000385190 85 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 MIR634-201ENST00000385208 97 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 AL451046.2-201ENST00000403074 277 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 RN7SKP192-201ENST00000411291 327 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 BX510359.4-201ENST00000423750 193 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 HSPE1P9-201ENST00000440046 311 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 AC069257.2-201ENST00000441819 155 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 AP004217.1-201ENST00000480579 346 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 SNORA31.10-201ENST00000516482 106 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 RNA5SP367-201ENST00000516557 118 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 RNA5SP33-201ENST00000516687 98 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 AC027279.3-201ENST00000625055 122 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 MIR3651-201ENST00000630427 90 ntBASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HIF3AQ9Y2N7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 Y_RNA.221-201ENST00000364248 96 ntBASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 Y_RNA.244-201ENST00000364484 109 ntBASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 RNU1-148P-201ENST00000384472 162 ntBASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 NDUFB4P4-201ENST00000404822 243 ntBASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 MIR1270-201ENST00000459320 83 ntBASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 RN7SKP57-201ENST00000517248 293 ntBASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.68□□□□□ -1.98
HIF3AQ9Y2N7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 Y_RNA.95-201ENST00000363079 95 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 Y_RNA.299-201ENST00000364973 94 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 SNORA32-201ENST00000384072 121 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 SNORD77B-201ENST00000391112 67 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 U8.16-201ENST00000391279 133 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 UBL5P3-201ENST00000475112 231 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-521P-201ENST00000516663 105 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 RNA5SP137-201ENST00000516833 135 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 MIR5094-201ENST00000578766 85 ntBASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HIF3AQ9Y2N7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 SNORA22.1-201ENST00000362701 134 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-787P-201ENST00000384032 107 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-675P-201ENST00000384236 104 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 SNORD116-22-201ENST00000384430 92 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-1190P-201ENST00000410811 104 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 RNA5SP395-201ENST00000516567 118 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 Y_RNA.705-201ENST00000516862 110 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 RNU6-958P-201ENST00000516995 106 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 MIR5588-201ENST00000581890 63 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 AL512310.12-203ENST00000640543 90 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.66□□□□□ -1.98
HIF3AQ9Y2N7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
HIF3AQ9Y2N7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
HIF3AQ9Y2N7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 SNORD115-35-201ENST00000365122 82 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 Y_RNA.437-201ENST00000384113 113 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 RNU6-950P-201ENST00000384651 107 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 RNU11-3P-201ENST00000391111 133 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 RNU6-887P-201ENST00000410660 100 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 RNU7-34P-201ENST00000459394 64 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 AC008885.1-201ENST00000514930 301 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
HIF3AQ9Y2N7 SNORA71.1-201ENST00000364523 117 ntBASIC2.64□□□□□ -1.99
HIF3AQ9Y2N7 Y_RNA.313-201ENST00000365095 103 ntBASIC2.64□□□□□ -1.99
HIF3AQ9Y2N7 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
HIF3AQ9Y2N7 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms