Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 MIR2052-201ENST00000636055 55 ntBASIC2.67□□□□□ -1.98
AP4E1Q9UPM8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 AC062016.1-201ENST00000355719 319 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 Y_RNA.93-201ENST00000363066 109 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-19-201ENST00000363098 82 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-18-201ENST00000363293 82 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 SNORD115-17-201ENST00000364612 82 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 Y_RNA.466-201ENST00000384294 113 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 AC113410.1-201ENST00000505029 247 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 RNU6-826P-201ENST00000516827 104 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 MIR3618-201ENST00000580330 88 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 AC062037.1-201ENST00000605302 128 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 AC021613.1-201ENST00000623880 111 ntBASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.66□□□□□ -1.98
AP4E1Q9UPM8 RNU6-661P-201ENST00000362409 107 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 Y_RNA.107-201ENST00000363190 121 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 RNU6-833P-201ENST00000363486 107 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 Y_RNA.342-201ENST00000365352 113 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 U8.16-201ENST00000391279 133 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 POLR2J4-204ENST00000418424 324 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 RNU7-181P-201ENST00000517234 74 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 IGLV3-17-201ENST00000519099 244 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 MIR5094-201ENST00000578766 85 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 MIR5092-201ENST00000583139 88 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 AC092881.1-201ENST00000638218 2733 ntBASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
AP4E1Q9UPM8 SNORA5B-201ENST00000363786 132 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 SNORA63D-201ENST00000364359 132 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 RNU1-148P-201ENST00000384472 162 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 RNA5SP184-201ENST00000411071 108 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 AL512326.2-201ENST00000426359 151 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 AC069257.2-201ENST00000441819 155 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 RNA5SP57-201ENST00000459463 123 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 AC004812.1-201ENST00000540773 146 ntBASIC2.64□□□□□ -1.99
AP4E1Q9UPM8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 MIR597-201ENST00000384968 97 ntBASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 AL022718.1-201ENST00000412004 84 ntBASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 AC108938.1-201ENST00000451204 136 ntBASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 RPPH1-2P-201ENST00000516688 293 ntBASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 MIR1255B1-201ENST00000636325 63 ntBASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
AP4E1Q9UPM8 RNY3P2-201ENST00000362918 102 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 SNORA4.2-201ENST00000365313 147 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 Y_RNA.531-201ENST00000384589 121 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 MIR196B-201ENST00000384852 84 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 MIR1283-2-201ENST00000408621 87 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 RPS3AP1-201ENST00000413190 320 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 RNU2-11P-201ENST00000459191 187 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 AC107297.1-201ENST00000459991 176 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 RNA5SP168-201ENST00000516642 112 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 DEFB131E-201ENST00000532329 154 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 MIR4298-201ENST00000584380 73 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 Y_RNA.773-201ENST00000607168 90 ntBASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
AP4E1Q9UPM8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 RNU6-1099P-201ENST00000363533 107 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 RNU4-36P-201ENST00000364294 144 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 AL034345.1-201ENST00000407768 123 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 MIR1267-201ENST00000408723 78 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 RNU7-45P-201ENST00000459460 63 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 SCARNA23-201ENST00000516060 130 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
AP4E1Q9UPM8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 AL353813.1-201ENST00000440700 253 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 RNA5SP320-201ENST00000516263 124 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 RNA5SP137-201ENST00000516833 135 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 RNU6-1258P-201ENST00000516911 111 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR4694-201ENST00000578534 80 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 RPL12P50-201ENST00000603116 116 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 AL513534.2-201ENST00000603836 250 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 AC103810.6-201ENST00000606708 136 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIR6841-201ENST00000637129 72 ntBASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
AP4E1Q9UPM8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms