Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MIR4419B-201ENST00000577260 68 ntBASIC1.73□□□□□ -2.13
VPS4AQ9UN37 AC024614.2-201ENST00000577584 372 ntBASIC1.73□□□□□ -2.13
VPS4AQ9UN37 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
VPS4AQ9UN37 MIR8074-201ENST00000615081 81 ntBASIC1.73□□□□□ -2.13
VPS4AQ9UN37 AC084768.2-201ENST00000622736 221 ntBASIC1.73□□□□□ -2.13
VPS4AQ9UN37 RNU6-888P-201ENST00000363010 101 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 SNORD14E-201ENST00000364009 85 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 Y_RNA.224-201ENST00000364308 111 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 Y_RNA.272-201ENST00000364696 102 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 MIR548A2-201ENST00000384956 97 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
VPS4AQ9UN37 RNU6-239P-201ENST00000390990 99 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 SNORA67.5-201ENST00000391036 107 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 AP1B1P2-201ENST00000416196 106 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 RPS29P11-201ENST00000496507 171 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 RNU6-830P-201ENST00000516353 107 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 RNU6-365P-201ENST00000517113 106 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 AC015688.6-201ENST00000577737 104 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
VPS4AQ9UN37 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.72□□□□□ -2.13
VPS4AQ9UN37 MIR302D-201ENST00000362275 68 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 RNU6-414P-201ENST00000363705 104 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 MIR489-201ENST00000384923 84 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 AL627390.1-201ENST00000396055 340 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 RNU6-504P-201ENST00000516568 104 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 SNORA44.1-201ENST00000517031 108 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 MIR378D2-201ENST00000580636 98 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 SNORD3E-202ENST00000627253 216 ntBASIC1.71□□□□□ -2.14
VPS4AQ9UN37 RNU6-597P-201ENST00000365620 102 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 SNORD61-201ENST00000384252 73 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 MIR653-201ENST00000385279 96 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 SNORA79-201ENST00000408376 140 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 RNU2-70P-201ENST00000410718 179 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 AC093850.1-201ENST00000454121 251 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 AC107027.2-201ENST00000512197 115 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 AC090142.3-201ENST00000519012 385 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 MIR3144-201ENST00000579460 79 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 AL512598.1-201ENST00000610158 273 ntBASIC1.7□□□□□ -2.14
VPS4AQ9UN37 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
VPS4AQ9UN37 Y_RNA.357-201ENST00000365487 109 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 RNU6-1062P-201ENST00000383908 107 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 MIR526A1-201ENST00000384897 85 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 MIR1267-201ENST00000408723 78 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 AC015922.2-201ENST00000435593 184 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 Y_RNA.666-201ENST00000516187 112 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 AC007751.1-201ENST00000529260 376 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 BX248123.2-201ENST00000606318 124 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 MIR8081-201ENST00000611533 95 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.69□□□□□ -2.14
VPS4AQ9UN37 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VPS4AQ9UN37 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 MIR518F-201ENST00000384973 87 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 MIR452-201ENST00000385020 85 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 SNRPGP13-201ENST00000442212 177 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 SNORD116-25-201ENST00000516517 92 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 DNAJC19P9-201ENST00000555084 351 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 MIR4778-201ENST00000577635 80 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.68□□□□□ -2.14
VPS4AQ9UN37 AL365205.2-201ENST00000594586 68 ntBASIC1.68□□□□□ -2.14
VPS4AQ9UN37 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
VPS4AQ9UN37 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VPS4AQ9UN37 RNU6-199P-201ENST00000362954 107 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 Y_RNA.337-201ENST00000365312 102 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 AC006461.1-201ENST00000412637 326 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 RNU4-57P-201ENST00000515980 135 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 RNU6-255P-201ENST00000516957 105 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 MIR3646-201ENST00000578301 84 ntBASIC1.67□□□□□ -2.14
VPS4AQ9UN37 SNORA2.2-201ENST00000365473 135 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 Y_RNA.393-201ENST00000383936 102 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 RNU6-804P-201ENST00000384286 107 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 Y_RNA.547-201ENST00000384654 119 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 MIR513A1-201ENST00000385138 129 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 RNU6-917P-201ENST00000516294 104 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 RNU7-25P-201ENST00000516544 62 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 RNU6-250P-201ENST00000516958 103 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 SUMO2P16-201ENST00000519475 264 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 AC021753.1-201ENST00000635724 168 ntBASIC1.66□□□□□ -2.14
VPS4AQ9UN37 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
VPS4AQ9UN37 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.65□□□□□ -2.14
VPS4AQ9UN37 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
VPS4AQ9UN37 SNORD38C-201ENST00000384381 69 ntBASIC1.65□□□□□ -2.15
VPS4AQ9UN37 Y_RNA.542-201ENST00000384641 111 ntBASIC1.65□□□□□ -2.15
VPS4AQ9UN37 RNU6-768P-201ENST00000384683 107 ntBASIC1.65□□□□□ -2.15
VPS4AQ9UN37 MIR548O-201ENST00000408583 114 ntBASIC1.65□□□□□ -2.15
VPS4AQ9UN37 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS4AQ9UN37 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
VPS4AQ9UN37 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.65□□□□□ -2.15
VPS4AQ9UN37 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.65□□□□□ -2.15
VPS4AQ9UN37 DNAJC19P2-201ENST00000593340 302 ntBASIC1.65□□□□□ -2.15
VPS4AQ9UN37 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
VPS4AQ9UN37 Y_RNA.170-201ENST00000363746 110 ntBASIC1.64□□□□□ -2.15
VPS4AQ9UN37 RNU6-1130P-201ENST00000365434 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms