Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 MIR369-201ENST00000362155 70 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-1048P-201ENST00000364054 107 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.380-201ENST00000365663 111 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 SNORD115-46-201ENST00000390982 71 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 SNORD28B-201ENST00000390993 75 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 MIR1252-201ENST00000408861 65 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-613P-201ENST00000410412 108 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.602-201ENST00000410535 92 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-847P-201ENST00000411115 108 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-988P-201ENST00000519081 107 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 AC036111.3-201ENST00000526389 112 ntBASIC0.69□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.14-201ENST00000362415 103 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 SNORD89-201ENST00000390981 114 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 SNORA53-201ENST00000391141 249 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 SNORA26.5-201ENST00000391215 123 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 RNA5SP496-201ENST00000391240 109 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 RNU2-14P-201ENST00000411053 191 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 RPS26P5-201ENST00000418544 335 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 AC098869.1-201ENST00000481627 292 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-764P-201ENST00000516396 105 ntBASIC0.68□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.389-201ENST00000383924 113 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.418-201ENST00000384029 102 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-514P-201ENST00000384208 107 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 SNORA2B-201ENST00000384583 137 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-823P-201ENST00000391042 103 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 RNA5SP127-201ENST00000411051 133 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 AC010655.3-201ENST00000478818 450 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 AL117351.2-201ENST00000513571 157 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-397P-201ENST00000516226 104 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 SNORA40.15-201ENST00000516884 107 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-897P-201ENST00000517135 105 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 MIR2909-201ENST00000617113 69 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 MIR6516-201ENST00000630554 81 ntBASIC0.67□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.28-201ENST00000362554 111 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.460-201ENST00000384255 102 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 SNORD72-201ENST00000390994 80 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.581-201ENST00000391017 97 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 MIR1278-201ENST00000408753 81 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 MTND4LP11-201ENST00000422184 280 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 AL035398.1-201ENST00000430869 322 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 MTATP6P23-201ENST00000440153 476 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 HSPE1P25-201ENST00000455484 251 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 RNU6-126P-201ENST00000516685 103 ntBASIC0.66□□□□□ -2.3
NPC1L1Q9UHC9 Y_RNA.168-201ENST00000363740 102 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 MT-TN-201ENST00000387400 73 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-763P-201ENST00000390865 106 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 AL603910.2-201ENST00000407268 136 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 MIR1302-7-201ENST00000408841 72 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.631-201ENST00000459607 101 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-1143P-201ENST00000516125 104 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 RNU7-181P-201ENST00000517234 74 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 MIR4662B-201ENST00000579498 81 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 AP000753.3-201ENST00000604083 169 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 MIR4791-201ENST00000607666 84 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 AC013791.1-201ENST00000616619 62 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 MIR5087-201ENST00000635826 76 ntBASIC0.65□□□□□ -2.31
NPC1L1Q9UHC9 MIR1-1-201ENST00000362147 71 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 MIR367-201ENST00000362299 68 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.152-201ENST00000363578 100 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-290P-201ENST00000365212 101 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-308P-201ENST00000390957 107 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.645-201ENST00000391229 102 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 MTCO1P5-201ENST00000433573 344 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 RNU4-57P-201ENST00000515980 135 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 RNU2-31P-201ENST00000516954 155 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 MIR4724-201ENST00000579485 89 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-94P-201ENST00000607728 107 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 uc_338.4-201ENST00000616635 176 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 AL160413.1-201ENST00000622780 310 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 AC022140.2-201ENST00000623500 188 ntBASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.64□□□□□ -2.31
NPC1L1Q9UHC9 MIR377-201ENST00000362145 69 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 SNORA25.1-201ENST00000362326 128 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.128-201ENST00000363391 112 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.813-201ENST00000364639 102 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-326P-201ENST00000365480 107 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.419-201ENST00000384041 102 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 PMCHL1-202ENST00000423102 261 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 MRPS35P2-201ENST00000508242 191 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 RAC1P9-201ENST00000604990 392 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 AC243829.6-201ENST00000612652 106 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 AC243994.1-201ENST00000618627 109 ntBASIC0.63□□□□□ -2.31
NPC1L1Q9UHC9 RNA5SP62-201ENST00000363457 110 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-654P-201ENST00000364373 107 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 RNU6-1138P-201ENST00000365359 106 ntBASIC0.62□□□□□ -2.31
NPC1L1Q9UHC9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms