Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 USP9YP30-201ENST00000430729 455 ntBASIC-1□□□□□ -2.57
COMMD3Q9UBI1 RNU6-436P-201ENST00000516171 114 ntBASIC-1□□□□□ -2.57
COMMD3Q9UBI1 RNU7-161P-201ENST00000517289 62 ntBASIC-1□□□□□ -2.57
COMMD3Q9UBI1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1□□□□□ -2.57
COMMD3Q9UBI1 AC073648.5-201ENST00000603502 305 ntBASIC-1□□□□□ -2.57
COMMD3Q9UBI1 AC097520.1-201ENST00000624435 385 ntBASIC-1□□□□□ -2.57
COMMD3Q9UBI1 AC093726.3-201ENST00000637588 150 ntBASIC-1□□□□□ -2.57
COMMD3Q9UBI1 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 RNU6-710P-201ENST00000410424 105 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 SNORD12B-201ENST00000410433 91 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 BX276092.1-201ENST00000427368 251 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 AC083798.1-201ENST00000472671 131 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.01□□□□□ -2.57
COMMD3Q9UBI1 RNU6-874P-201ENST00000362390 105 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 SNORA63.5-201ENST00000363548 123 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 RNU6-553P-201ENST00000364047 96 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 RNY3P10-201ENST00000384764 102 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 RN7SKP142-201ENST00000411236 328 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 RNU6-938P-201ENST00000411285 103 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 RNU6-408P-201ENST00000515910 100 ntBASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.02□□□□□ -2.57
COMMD3Q9UBI1 RNU6-653P-201ENST00000363074 106 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNA5SP403-201ENST00000363598 108 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 SNORD115-28-201ENST00000363931 81 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 SNORD95.1-201ENST00000364099 68 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNU6-949P-201ENST00000384040 107 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 SNORD77.3-201ENST00000391113 65 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNU6-648P-201ENST00000410190 107 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNU7-87P-201ENST00000459343 62 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 AC074198.2-201ENST00000508153 258 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNU7-115P-201ENST00000516433 55 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 SNORA25.16-201ENST00000516741 121 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 AC141846.1-201ENST00000568348 142 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNU6-89P-201ENST00000606519 100 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 AC105081.1-201ENST00000617727 106 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 AC079248.2-201ENST00000623779 326 ntBASIC-1.03□□□□□ -2.57
COMMD3Q9UBI1 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 RNU6-961P-201ENST00000363893 105 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 RNA5SP368-201ENST00000364298 116 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 SNORA26.6-201ENST00000391256 115 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 RNU7-104P-201ENST00000459398 79 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 RNU7-96P-201ENST00000459535 64 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 AC010655.3-201ENST00000478818 450 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 AC021146.6-201ENST00000514659 117 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 MIR548AY-201ENST00000617669 107 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 MTND5P32-201ENST00000560711 1802 ntBASIC-1.04□□□□□ -2.58
COMMD3Q9UBI1 RNU4-50P-201ENST00000364361 141 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 MTND1P27-201ENST00000451117 902 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 RNU7-66P-201ENST00000459469 62 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 SNORD11.1-201ENST00000459482 85 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 RNA5SP169-201ENST00000517268 117 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 ZNF519P2-201ENST00000557032 169 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 MIR6717-201ENST00000622747 73 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 AF246928.1-201ENST00000623768 87 ntBASIC-1.05□□□□□ -2.58
COMMD3Q9UBI1 RNU6-509P-201ENST00000363519 107 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU6-306P-201ENST00000384617 107 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU4-55P-201ENST00000410731 137 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU4-63P-201ENST00000411313 118 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 MTND2P39-201ENST00000457230 764 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU6-998P-201ENST00000515894 101 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU6-155P-201ENST00000516347 100 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 RNU6-232P-201ENST00000517144 64 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 AC060788.1-201ENST00000521318 469 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 AC018462.2-201ENST00000605375 395 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 AC107308.1-201ENST00000615897 301 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 AC007494.3-201ENST00000624660 743 ntBASIC-1.06□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 RNU6-490P-201ENST00000362985 107 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 RNU6-702P-201ENST00000364982 107 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 SNORD116-9-201ENST00000384000 95 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 SNORD116-3-201ENST00000384287 95 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 SNORD116-8-201ENST00000384365 95 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 SNORD116-7-201ENST00000384404 95 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 SNORD116-5-201ENST00000384462 95 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 RNU6-256P-201ENST00000516747 97 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 RNU6-835P-201ENST00000516974 104 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 MIR4423-201ENST00000580922 80 ntBASIC-1.07□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 MIR620-201ENST00000385232 95 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 MIR1278-201ENST00000408753 81 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 RNA5SP484-201ENST00000458857 111 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 MIR2355-201ENST00000517199 87 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 AL080274.1-201ENST00000605565 220 ntBASIC-1.08□□□□□ -2.58
COMMD3Q9UBI1 AC027449.1-201ENST00000608890 407 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms