Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.02□□□□□ -2.09
LRIT1Q9P2V4 AC087685.1-201ENST00000587507 141 ntBASIC2.02□□□□□ -2.09
LRIT1Q9P2V4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LRIT1Q9P2V4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LRIT1Q9P2V4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 RNA5SP99-201ENST00000364020 114 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 RNU6-1064P-201ENST00000410626 104 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 RNU6-938P-201ENST00000411285 103 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 AC069114.2-201ENST00000604699 304 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 AL353997.5-201ENST00000618886 171 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
LRIT1Q9P2V4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2□□□□□ -2.09
LRIT1Q9P2V4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LRIT1Q9P2V4 RNU6-834P-201ENST00000362367 110 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 SNORA63.4-201ENST00000362763 126 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 Y_RNA.265-201ENST00000364677 108 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 SNORD18B-201ENST00000365659 72 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 RNU6-1144P-201ENST00000384247 104 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 Y_RNA.547-201ENST00000384654 119 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 RNU6-476P-201ENST00000384726 107 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 MIRLET7F2-201ENST00000385277 83 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 RNY4P18-201ENST00000391107 89 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 AC114811.1-201ENST00000507207 168 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 AC133485.4-201ENST00000561835 220 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 AC138907.4-201ENST00000570107 226 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 Y_RNA.783-201ENST00000613546 102 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 5S_rRNA.11-201ENST00000618635 84 ntBASIC2□□□□□ -2.09
LRIT1Q9P2V4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
LRIT1Q9P2V4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 RNU6-1084P-201ENST00000362498 107 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 SNORA63D-201ENST00000364359 132 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 snoU2-30.1-201ENST00000365012 70 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 RNU6-442P-201ENST00000383968 104 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 RNA5SP482-201ENST00000391269 118 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 AC019129.1-201ENST00000403786 261 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 CALM2P4-201ENST00000430810 426 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 SNORD36C-201ENST00000516733 66 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 RNA5SP437-201ENST00000517249 129 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 MIR5197-201ENST00000583721 112 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 AL627230.6-201ENST00000611129 280 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.99□□□□□ -2.09
LRIT1Q9P2V4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 SNORD14E-201ENST00000364009 85 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 RNA5SP501-201ENST00000410990 112 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 AC244636.1-201ENST00000421152 228 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 RPL23AP6-201ENST00000446637 472 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 RN7SKP19-201ENST00000516016 252 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 RNU6-295P-201ENST00000516901 104 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 Y_RNA.714-201ENST00000517065 90 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 MTND5P34-201ENST00000568888 325 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LRIT1Q9P2V4 Y_RNA.37-201ENST00000362606 108 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 RNU6-647P-201ENST00000364243 107 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 RNU6-153P-201ENST00000364422 104 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 U8.13-201ENST00000390842 128 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 U8.16-201ENST00000391279 133 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 RNU6-589P-201ENST00000516485 107 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 MIR5002-201ENST00000584713 97 ntBASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LRIT1Q9P2V4 SNORD115-28-201ENST00000363931 81 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 RNU6-296P-201ENST00000384608 107 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 MIR802-201ENST00000390235 94 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 SNORA48.1-201ENST00000390879 135 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 RNU7-28P-201ENST00000516759 62 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 SUB1P4-201ENST00000566062 339 ntBASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LRIT1Q9P2V4 AL442644.1-201ENST00000454390 3105 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.336-201ENST00000365307 109 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 RNA5SP212-201ENST00000391223 107 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 RNA5SP57-201ENST00000459463 123 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 RPL23AP63-201ENST00000498752 471 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 Y_RNA.709-201ENST00000516952 92 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 AC134878.1-201ENST00000619901 243 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 AC015726.2-201ENST00000620112 122 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 U6.95-201ENST00000636931 70 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 ZNF355P-201ENST00000427301 3216 ntBASIC1.95□□□□□ -2.1
LRIT1Q9P2V4 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
LRIT1Q9P2V4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 226.5 ms