Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 SNORA3A-201ENST00000364113 130 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 RPS29P24-201ENST00000486345 171 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 AC007012.1-201ENST00000567192 175 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 AC002984.1-201ENST00000591692 448 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 AC078899.2-201ENST00000595282 212 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 SNORD114-1-201ENST00000362705 72 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 MIR516B2-201ENST00000385190 85 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 MIR660-201ENST00000385235 97 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 RNA5SP450-201ENST00000411206 102 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 RNU7-164P-201ENST00000459221 62 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 RNU7-181P-201ENST00000517234 74 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 SNORA31.25-201ENST00000517242 134 ntBASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CXXC1Q9P0U4 AC008555.8-201ENST00000623602 2168 ntBASIC2.84□□□□□ -1.96
CXXC1Q9P0U4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 SNORA70.7-201ENST00000384159 133 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 RN7SKP123-201ENST00000410732 291 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 PGBD4P5-201ENST00000445958 426 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 RNU6-998P-201ENST00000515894 101 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 RN7SKP43-201ENST00000516173 320 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 SNORD3E-202ENST00000627253 216 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 AC131280.1-202ENST00000624067 4211 ntBASIC2.83□□□□□ -1.96
CXXC1Q9P0U4 AL442644.1-201ENST00000454390 3105 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 MIR26A1-201ENST00000362205 77 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 Y_RNA.298-201ENST00000364960 107 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 AC093850.1-201ENST00000454121 251 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 RNU7-193P-201ENST00000516723 65 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 SUMO2P16-201ENST00000519475 264 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 AC245166.1-201ENST00000521012 253 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 MIR4305-201ENST00000583252 102 ntBASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CXXC1Q9P0U4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 RNY4P6-201ENST00000363667 96 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 Y_RNA.281-201ENST00000364774 94 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 MIR27B-201ENST00000385129 97 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 MIR1287-201ENST00000408492 90 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 UQCRHP3-201ENST00000451503 251 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 MIR3683-201ENST00000580847 82 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CXXC1Q9P0U4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 Y_RNA.370-201ENST00000365589 108 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 RNU6-147P-201ENST00000383983 107 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 SNORD12C-201ENST00000386307 89 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 RNA5SP100-201ENST00000410903 110 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 RNA5SP59-201ENST00000410922 110 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 HMGN2P23-201ENST00000456759 269 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 MIR1273D-201ENST00000577266 86 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CXXC1Q9P0U4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 MIR424-201ENST00000362227 98 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 RNU4-16P-201ENST00000364737 141 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 AL031737.1-201ENST00000450125 223 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 AC099513.1-201ENST00000490423 301 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 MIR3613-201ENST00000579844 87 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 AP000648.3-201ENST00000623539 4507 ntBASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CXXC1Q9P0U4 Y_RNA.116-201ENST00000363292 103 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 RNU6-414P-201ENST00000363705 104 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 RNU6-1107P-201ENST00000364817 104 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 RNU6-360P-201ENST00000390944 104 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 RNU2-11P-201ENST00000459191 187 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 RN7SL75P-201ENST00000461926 281 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 RNU7-123P-201ENST00000515911 60 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 AL589743.1-201ENST00000551932 2712 ntBASIC2.78□□□□□ -1.96
CXXC1Q9P0U4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.49-201ENST00000362714 112 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.85-201ENST00000363014 111 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 RNU7-53P-201ENST00000516705 60 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 SNORA31.17-201ENST00000516953 127 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 MIR4679-2-201ENST00000578358 77 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 AC093831.2-201ENST00000624393 3427 ntBASIC2.77□□□□□ -1.97
CXXC1Q9P0U4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 Y_RNA.494-201ENST00000384432 111 ntBASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 AL590004.2-201ENST00000404787 371 ntBASIC2.76□□□□□ -1.97
CXXC1Q9P0U4 RNU7-67P-201ENST00000459003 62 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms