Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 AC006160.2-201ENST00000637708 154 ntBASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LMCD1Q9NZU5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 AC018630.2-201ENST00000534866 2403 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 MIR577-201ENST00000385196 96 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 Y_RNA.620-201ENST00000411009 88 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 AC009238.1-201ENST00000442165 424 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 AC009237.6-201ENST00000446969 424 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 AL049830.1-201ENST00000468034 425 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 AC113410.1-201ENST00000505029 247 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 AC023141.11-201ENST00000508864 202 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 RNA5SP82-201ENST00000516707 92 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 RNU6-341P-201ENST00000516973 96 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 MIR4694-201ENST00000578534 80 ntBASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.81□□□□□ -1.96
LMCD1Q9NZU5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 RNA5SP289-201ENST00000362332 137 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 Y_RNA.10-201ENST00000362371 110 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 SNORD68-201ENST00000363214 84 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 MIR522-201ENST00000385071 87 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 CYP2C59P-201ENST00000457790 269 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 RNU7-164P-201ENST00000459221 62 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 RNU1-142P-201ENST00000516682 145 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 Y_RNA.714-201ENST00000517065 90 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 MIR4777-201ENST00000583710 86 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 U6.108-201ENST00000637764 58 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 AC091304.10-201ENST00000641554 121 ntBASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.8□□□□□ -1.96
LMCD1Q9NZU5 SNORA1B-201ENST00000362535 133 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 RNU6-832P-201ENST00000363319 107 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 Y_RNA.426-201ENST00000384068 113 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 Y_RNA.531-201ENST00000384589 121 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 RNA5SP323-201ENST00000391094 133 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 MIR548O-201ENST00000408583 114 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 RNU2-48P-201ENST00000410694 191 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 FTH1P12-201ENST00000432137 551 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 MIR338-201ENST00000636369 67 ntBASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LMCD1Q9NZU5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 RNU6-652P-201ENST00000365488 107 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 RNU6-1189P-201ENST00000383958 107 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 RNY1P6-201ENST00000384193 109 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 SNORD38C-201ENST00000384381 69 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 RNU11-5P-201ENST00000391216 129 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 AL353813.1-201ENST00000440700 253 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 SNORA31.11-201ENST00000516528 139 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 RNU7-25P-201ENST00000516544 62 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 RNU7-70P-201ENST00000516941 66 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 MIR4668-201ENST00000582284 70 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 AL355297.2-201ENST00000604792 129 ntBASIC2.78□□□□□ -1.96
LMCD1Q9NZU5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
LMCD1Q9NZU5 MAPK10-266ENST00000641066 6555 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 RNU6-1084P-201ENST00000362498 107 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.94-201ENST00000363068 106 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 RNU6-60P-201ENST00000364792 103 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 SNORA8-201ENST00000384574 139 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 U8.17-201ENST00000391292 132 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 RNU2-63P-201ENST00000410792 194 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 MRPL35P3-201ENST00000421557 364 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 RNU2-35P-201ENST00000516446 142 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 RNU6-667P-201ENST00000517186 102 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 MIR3618-201ENST00000580330 88 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 AC087685.1-201ENST00000587507 141 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 AC087741.2-201ENST00000619415 172 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 MIR1255B1-201ENST00000636325 63 ntBASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.77□□□□□ -1.97
LMCD1Q9NZU5 SNORD114-6-201ENST00000364393 72 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.242-201ENST00000364473 110 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.360-201ENST00000365512 102 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.454-201ENST00000384224 113 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 MIR95-201ENST00000385072 81 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 MIR764-201ENST00000390811 85 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 MIR1289-2-201ENST00000408360 111 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 RNU2-11P-201ENST00000459191 187 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 RNA5SP320-201ENST00000516263 124 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 SNORD36C-201ENST00000516733 66 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 RNU6-548P-201ENST00000517083 115 ntBASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.76□□□□□ -1.97
LMCD1Q9NZU5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.4-201ENST00000362333 112 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 SNORD14E-201ENST00000364009 85 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 RNU6-1229P-201ENST00000364295 107 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.410-201ENST00000383992 113 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 Y_RNA.547-201ENST00000384654 119 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 HMGN2P3-201ENST00000433603 273 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 HMGN2P5-201ENST00000436882 273 ntBASIC2.75□□□□□ -1.97
LMCD1Q9NZU5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms