Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CUEDC1Q9NWM3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 RNA5SP374-201ENST00000362939 125 ntBASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 SNORA80A-201ENST00000363922 136 ntBASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 Y_RNA.191-201ENST00000363972 113 ntBASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 RNA5SP261-201ENST00000410536 106 ntBASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CUEDC1Q9NWM3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 U8.9-201ENST00000365667 134 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 RNA5SP33-201ENST00000516687 98 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 MIR548AE2-201ENST00000583456 67 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 ELOCP29-201ENST00000588193 334 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 uc_338.1-201ENST00000612113 180 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 AC027279.3-201ENST00000625055 122 ntBASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CUEDC1Q9NWM3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CUEDC1Q9NWM3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.15□□□□□ -1.9
CUEDC1Q9NWM3 RNU6-160P-201ENST00000384591 107 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 RNU4-47P-201ENST00000410876 114 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP270-201ENST00000411361 118 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 AC090844.1-201ENST00000422019 156 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 UBL5P3-201ENST00000475112 231 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 MIR7106-201ENST00000612419 65 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 MIR6841-201ENST00000637129 72 ntBASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
CUEDC1Q9NWM3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 SNORA22.1-201ENST00000362701 134 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 AC069257.2-201ENST00000441819 155 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 AC114811.1-201ENST00000507207 168 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP341-201ENST00000516261 117 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 RNU6-1258P-201ENST00000516911 111 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 AC006023.1-201ENST00000603944 259 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 AC103810.7-201ENST00000607821 91 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 MIR376B-201ENST00000614515 100 ntBASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CUEDC1Q9NWM3 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 SNORA25.6-201ENST00000364121 118 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 SNORA70.7-201ENST00000384159 133 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 Y_RNA.470-201ENST00000384307 117 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 MIR29C-201ENST00000385231 88 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 MIR1262-201ENST00000408276 93 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 MIR1267-201ENST00000408723 78 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 AC245047.3-201ENST00000429428 127 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 CST9LP2-201ENST00000437612 320 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 HMGN1P18-201ENST00000457642 277 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 MIR1270-201ENST00000459320 83 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 AC007536.1-201ENST00000533382 349 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 MIR4712-201ENST00000583750 82 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 AC022202.1-201ENST00000613515 211 ntBASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.13□□□□□ -1.91
CUEDC1Q9NWM3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP383-201ENST00000362934 120 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 Y_RNA.140-201ENST00000363474 103 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 SNORA5B-201ENST00000363786 132 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 SNORD38.1-201ENST00000363863 68 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 SNORA1.2-201ENST00000365189 134 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 Y_RNA.494-201ENST00000384432 111 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 AL445685.2-201ENST00000422551 342 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 AL161932.1-201ENST00000437408 146 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 TRBV12-1-201ENST00000479785 344 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 MIR5194-201ENST00000582634 120 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 MIR4672-201ENST00000583126 81 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 SNORA28-201ENST00000606769 126 ntBASIC3.12□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP126-201ENST00000365092 109 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 RNU6-163P-201ENST00000384396 106 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 MIR889-201ENST00000401280 79 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 Y_RNA.609-201ENST00000410669 89 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 SUMO1P4-201ENST00000429430 302 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 RNU7-53P-201ENST00000516705 60 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 RNA5SP137-201ENST00000516833 135 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 AC145423.2-201ENST00000610631 239 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 MIR6715A-201ENST00000615929 79 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 ICE2P2-201ENST00000483823 2787 ntBASIC3.11□□□□□ -1.91
CUEDC1Q9NWM3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 MIR422A-201ENST00000362286 90 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 RNU6-1163P-201ENST00000364516 107 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 AC015922.2-201ENST00000435593 184 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 AC104027.1-201ENST00000521887 300 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.1□□□□□ -1.91
CUEDC1Q9NWM3 DNAJC19P9-201ENST00000555084 351 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms