Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDLIM7Q9NR12 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 Y_RNA.37-201ENST00000362606 108 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 RNU6-440P-201ENST00000390882 105 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 SNORD23.1-201ENST00000408212 104 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 SNORD36C-201ENST00000516733 66 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 RNU7-28P-201ENST00000516759 62 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 SNORA31.25-201ENST00000517242 134 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 MIR4498-201ENST00000577599 66 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 AC005786.1-201ENST00000588553 154 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 MIR8054-201ENST00000620877 86 ntBASIC2.48□□□□□ -2.01
PDLIM7Q9NR12 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 Y_RNA.336-201ENST00000365307 109 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 MIR518A2-201ENST00000384966 87 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 RNA5SP136-201ENST00000410906 107 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 RNU6-240P-201ENST00000516098 97 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 RNU6-1116P-201ENST00000517269 99 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 AC084364.2-201ENST00000546924 395 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.47□□□□□ -2.01
PDLIM7Q9NR12 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 RNU1-17P-201ENST00000363022 152 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 RNU6-938P-201ENST00000411285 103 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 RPS26P48-201ENST00000491713 339 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 AC114811.1-201ENST00000507207 168 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 AC108729.3-201ENST00000513484 108 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 RNA5SP200-201ENST00000516360 103 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 MIR5094-201ENST00000578766 85 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 AC015726.2-201ENST00000620112 122 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.02
PDLIM7Q9NR12 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 RNU6-1019P-201ENST00000364424 107 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 MIR597-201ENST00000384968 97 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 RNU6-1053P-201ENST00000515930 101 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 SNORA31.10-201ENST00000516482 106 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 AL049779.4-201ENST00000604500 156 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 AC069114.2-201ENST00000604699 304 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 MIR6845-201ENST00000613182 61 ntBASIC2.45□□□□□ -2.02
PDLIM7Q9NR12 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 RNU6-690P-201ENST00000365242 106 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 MIR570-201ENST00000384917 97 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 RNA5SP89-201ENST00000410300 108 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 HMGN2P32-201ENST00000444648 269 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 RNU7-70P-201ENST00000516941 66 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 RNU2-19P-201ENST00000517288 84 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 AC007012.1-201ENST00000567192 175 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 AL137847.3-201ENST00000611521 109 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 uc_338.28-201ENST00000612082 187 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 U1.36-201ENST00000620684 176 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 ZNF720P1-201ENST00000562403 1939 ntBASIC2.44□□□□□ -2.02
PDLIM7Q9NR12 MIR450A1-201ENST00000362262 91 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 Y_RNA.116-201ENST00000363292 103 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 SNORA6-201ENST00000384033 151 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 Y_RNA.440-201ENST00000384120 114 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 RNU6-163P-201ENST00000384396 106 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 RNU11-3P-201ENST00000391111 133 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 MIR1287-201ENST00000408492 90 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 COX6CP6-201ENST00000490840 228 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 RNU6-168P-201ENST00000516189 101 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 RNA5SP170-201ENST00000517150 101 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 AP003484.1-201ENST00000530974 250 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 SNORA28-201ENST00000606769 126 ntBASIC2.43□□□□□ -2.02
PDLIM7Q9NR12 MIRLET7C-201ENST00000362160 84 ntBASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 RNU6-349P-201ENST00000362402 107 ntBASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 HSPE1P9-201ENST00000440046 311 ntBASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 SCARNA16.3-201ENST00000516595 184 ntBASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 SNORA18.7-201ENST00000516910 131 ntBASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 AC002984.1-201ENST00000591692 448 ntBASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.42□□□□□ -2.02
PDLIM7Q9NR12 Y_RNA.281-201ENST00000364774 94 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 RNU1-133P-201ENST00000364867 167 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 Y_RNA.351-201ENST00000365436 96 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 SNORD38C-201ENST00000384381 69 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 Y_RNA.549-201ENST00000384657 102 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 SNORA48.3-201ENST00000391081 134 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 AL031737.1-201ENST00000450125 223 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 AC055731.1-201ENST00000474387 401 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 RNU6-412P-201ENST00000516434 106 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 MIR5002-201ENST00000584713 97 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 MIR4781-201ENST00000585250 76 ntBASIC2.41□□□□□ -2.02
PDLIM7Q9NR12 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.4□□□□□ -2.02
PDLIM7Q9NR12 Y_RNA.43-201ENST00000362670 111 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 RNU6-1107P-201ENST00000364817 104 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 SNORD12C-201ENST00000386307 89 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 AC087499.4-201ENST00000448505 178 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 RNY4P20-201ENST00000516678 93 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 RNA5SP82-201ENST00000516707 92 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 AC021443.1-201ENST00000604478 211 ntBASIC2.4□□□□□ -2.03
PDLIM7Q9NR12 RNU6-106P-201ENST00000384405 107 ntBASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PDLIM7Q9NR12 MIR1283-2-201ENST00000408621 87 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms