Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNU6-32P-201ENST00000383948 107 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 RNU6-13P-201ENST00000384248 107 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 RNU6-12P-201ENST00000384604 107 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 RNU6-41P-201ENST00000384741 107 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 SUMO1P4-201ENST00000429430 302 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 AC069257.2-201ENST00000441819 155 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 RNA5SP200-201ENST00000516360 103 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 SNORA28-201ENST00000606769 126 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 AC022202.1-201ENST00000613515 211 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 MIR8054-201ENST00000620877 86 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
BCAS3Q9H6U6 Y_RNA.4-201ENST00000362333 112 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 RNU6-1107P-201ENST00000364817 104 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.495-201ENST00000384435 112 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 AL627390.1-201ENST00000396055 340 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 SNORA31.15-201ENST00000516771 132 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 AC069114.2-201ENST00000604699 304 ntBASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.4□□□□□ -2.03
BCAS3Q9H6U6 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.164-201ENST00000363709 102 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.265-201ENST00000364677 108 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.323-201ENST00000365157 109 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 RNU1-148P-201ENST00000384472 162 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 SNORD12C-201ENST00000386307 89 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 RNU6-440P-201ENST00000390882 105 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 RNA5SP109-201ENST00000391010 116 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 HMGN2P23-201ENST00000456759 269 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 RPS29P24-201ENST00000486345 171 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 RNU6-240P-201ENST00000516098 97 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 SNORD36C-201ENST00000516733 66 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 AC084364.2-201ENST00000546924 395 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 SNRPGP19-201ENST00000603826 189 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 uc_338.28-201ENST00000612082 187 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 MIR219B-201ENST00000637023 88 ntBASIC2.39□□□□□ -2.03
BCAS3Q9H6U6 RNY4P6-201ENST00000363667 96 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 SNORA63D-201ENST00000364359 132 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 RNY1P6-201ENST00000384193 109 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 RNU6-554P-201ENST00000410466 106 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 RNU7-80P-201ENST00000459562 61 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 AC104435.1-201ENST00000483483 166 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 AP003484.1-201ENST00000530974 250 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 MIR3683-201ENST00000580847 82 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 AL049779.4-201ENST00000604500 156 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
BCAS3Q9H6U6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 RNU6-766P-201ENST00000362478 107 ntBASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.454-201ENST00000384224 113 ntBASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 SNORA31.10-201ENST00000516482 106 ntBASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.37□□□□□ -2.03
BCAS3Q9H6U6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.49-201ENST00000362714 112 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.213-201ENST00000364178 111 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 RNU1-133P-201ENST00000364867 167 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.298-201ENST00000364960 107 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 RNU6-690P-201ENST00000365242 106 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 RNU6-950P-201ENST00000384651 107 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 RNY4P20-201ENST00000516678 93 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 AC245060.5-201ENST00000610778 3293 ntBASIC2.36□□□□□ -2.03
BCAS3Q9H6U6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 MIR450A1-201ENST00000362262 91 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 RNU6-833P-201ENST00000363486 107 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.163-201ENST00000363702 113 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.328-201ENST00000365208 113 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 SNORD38C-201ENST00000384381 69 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.549-201ENST00000384657 102 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 MIR1283-2-201ENST00000408621 87 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 AC114811.1-201ENST00000507207 168 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 AC108729.3-201ENST00000513484 108 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 MIR4778-201ENST00000577635 80 ntBASIC2.35□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.226-201ENST00000364337 114 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 Y_RNA.369-201ENST00000365568 117 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 RN7SKP200-201ENST00000410564 320 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 BX510359.4-201ENST00000423750 193 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 STAG3L5P-204ENST00000443759 179 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 AL035470.1-201ENST00000622571 220 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 AC106754.2-201ENST00000623006 233 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 AC091932.4-201ENST00000623386 200 ntBASIC2.34□□□□□ -2.03
BCAS3Q9H6U6 AL589743.1-201ENST00000551932 2712 ntBASIC2.33□□□□□ -2.04
BCAS3Q9H6U6 Y_RNA.362-201ENST00000365518 110 ntBASIC2.33□□□□□ -2.04
BCAS3Q9H6U6 RNU6-1014P-201ENST00000383940 103 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms