Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 RNA5SP153-201ENST00000516498 76 ntBASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 RNU6-111P-201ENST00000517179 105 ntBASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 MIR4769-201ENST00000584126 77 ntBASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 AL512598.1-201ENST00000610158 273 ntBASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 MIR8065-201ENST00000620577 100 ntBASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC28BQ9BUN5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 SNORD24-201ENST00000383884 75 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 MIR764-201ENST00000390811 85 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 AL606845.1-201ENST00000404881 255 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 SNORD123-201ENST00000459473 70 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 RNU6-1299P-201ENST00000516316 100 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 SNORD111.1-201ENST00000516421 86 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 RNU6-365P-201ENST00000517113 106 ntBASIC1.03□□□□□ -2.24
CCDC28BQ9BUN5 Y_RNA.121-201ENST00000363309 113 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 SNORA1.2-201ENST00000365189 134 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-484P-201ENST00000384016 107 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.432-201ENST00000384087 111 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.486-201ENST00000384398 107 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-1067P-201ENST00000384752 107 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 SCARNA8-201ENST00000515924 131 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 SNORA18.7-201ENST00000516910 131 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 AC097639.2-201ENST00000603159 172 ntBASIC1.02□□□□□ -2.25
CCDC28BQ9BUN5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.7-201ENST00000362352 102 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU1-17P-201ENST00000363022 152 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.199-201ENST00000364014 102 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.200-201ENST00000364018 102 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNA5SP99-201ENST00000364020 114 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.308-201ENST00000365043 101 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-728P-201ENST00000365375 104 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 MIR520C-201ENST00000385005 87 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 MT-TT-201ENST00000387460 66 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 U8.17-201ENST00000391292 132 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 MIR548O-201ENST00000408583 114 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU4-57P-201ENST00000515980 135 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-237P-201ENST00000515985 71 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-504P-201ENST00000516568 104 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-453P-201ENST00000516819 85 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-1271P-201ENST00000517049 105 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 MIR4764-201ENST00000580680 88 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 MIR4744-201ENST00000581563 82 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 AC009779.6-201ENST00000603972 165 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 SNORD114-21-201ENST00000606412 72 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 AC141273.2-201ENST00000618989 130 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 AC015726.2-201ENST00000620112 122 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.01□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-888P-201ENST00000363010 101 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 SNORA7.1-201ENST00000363750 139 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.476-201ENST00000384347 108 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.547-201ENST00000384654 119 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 RNU4-43P-201ENST00000410628 137 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 AC087499.4-201ENST00000448505 178 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 SNRPGP8-201ENST00000454064 226 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1□□□□□ -2.25
CCDC28BQ9BUN5 SNORA31.4-201ENST00000516049 129 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.666-201ENST00000516187 112 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 RNU7-25P-201ENST00000516544 62 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 Z83818.1-201ENST00000603584 150 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 AP000942.4-201ENST00000604811 241 ntBASIC1□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.66-201ENST00000362862 102 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.140-201ENST00000363474 103 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-379P-201ENST00000363813 104 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 SNORD45.3-201ENST00000363836 72 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 RNA5SP48-201ENST00000363969 126 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.238-201ENST00000364441 102 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.634-201ENST00000364811 113 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.435-201ENST00000384095 112 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.552-201ENST00000384665 112 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 SNORA79-201ENST00000408376 140 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 RNU2-70P-201ENST00000410718 179 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 AC245047.7-201ENST00000440265 293 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 AC009474.2-201ENST00000451383 136 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 RNA5SP458-201ENST00000516188 119 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-947P-201ENST00000516264 106 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-197P-201ENST00000516680 100 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 MIR548AR-201ENST00000582191 57 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 AL096861.1-201ENST00000610899 123 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 AL353770.2-201ENST00000620024 78 ntBASIC0.99□□□□□ -2.25
CCDC28BQ9BUN5 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 MIR411-201ENST00000362239 96 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.83-201ENST00000363005 113 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 SNORD115-28-201ENST00000363931 81 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.515-201ENST00000384535 112 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-578P-201ENST00000390980 103 ntBASIC0.98□□□□□ -2.25
CCDC28BQ9BUN5 RNU6-493P-201ENST00000391321 108 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms