Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.75-201ENST00000362927 97 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.435-201ENST00000384095 112 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 MIR526A1-201ENST00000384897 85 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 MIR934-201ENST00000401241 83 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 RNU6-504P-201ENST00000516568 104 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 RNU6-922P-201ENST00000516753 99 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 AC090049.2-201ENST00000550377 109 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 AC006441.5-201ENST00000612680 209 ntBASIC1.61□□□□□ -2.15
PAAF1Q9BRP4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.634-201ENST00000364811 113 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNU6-484P-201ENST00000384016 107 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 MIR548O-201ENST00000408583 114 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 AL354695.1-201ENST00000427935 228 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.662-201ENST00000516028 97 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNU6-693P-201ENST00000516134 107 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNU6-917P-201ENST00000516294 104 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNA5SP153-201ENST00000516498 76 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNU6-197P-201ENST00000516680 100 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 RNU6-861P-201ENST00000516745 106 ntBASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
PAAF1Q9BRP4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.91-201ENST00000363042 107 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 Y_RNA.357-201ENST00000365487 109 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 AC006461.1-201ENST00000412637 326 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 RNU7-120P-201ENST00000459334 63 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 SNORA18.7-201ENST00000516910 131 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 RNU6-1270P-201ENST00000517128 108 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 SNORA31.24-201ENST00000517232 57 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 MRPS18CP4-201ENST00000535821 231 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 AL513534.2-201ENST00000603836 250 ntBASIC1.59□□□□□ -2.15
PAAF1Q9BRP4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PAAF1Q9BRP4 RNU6-312P-201ENST00000364629 107 ntBASIC1.58□□□□□ -2.16
PAAF1Q9BRP4 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
PAAF1Q9BRP4 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
PAAF1Q9BRP4 SNRPGP14-201ENST00000435400 219 ntBASIC1.58□□□□□ -2.16
PAAF1Q9BRP4 RNU7-25P-201ENST00000516544 62 ntBASIC1.58□□□□□ -2.16
PAAF1Q9BRP4 AC012493.3-201ENST00000604494 112 ntBASIC1.58□□□□□ -2.16
PAAF1Q9BRP4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 MIR302D-201ENST00000362275 68 ntBASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 Y_RNA.270-201ENST00000364693 104 ntBASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 RNU6-643P-201ENST00000384018 107 ntBASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 RNU4-43P-201ENST00000410628 137 ntBASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 RNU6-947P-201ENST00000516264 106 ntBASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
PAAF1Q9BRP4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 ZNF209P-201ENST00000593450 2304 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 Y_RNA.23-201ENST00000362496 106 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 SNORA7.1-201ENST00000363750 139 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 SNORD61-201ENST00000384252 73 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 Y_RNA.521-201ENST00000384560 114 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 MIR653-201ENST00000385279 96 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 AC027119.1-201ENST00000440877 241 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 AC009474.2-201ENST00000451383 136 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 SNORD116-25-201ENST00000516517 92 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 AL160236.1-201ENST00000556317 195 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 MIR4431-201ENST00000579990 94 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 MIR378D2-201ENST00000580636 98 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 AL357312.1-201ENST00000603879 298 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
PAAF1Q9BRP4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 SNORD115-28-201ENST00000363931 81 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 SNORD24-201ENST00000383884 75 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 Y_RNA.547-201ENST00000384654 119 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 SEPT7P4-201ENST00000437076 306 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 RNA5SP445-201ENST00000515889 115 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 RNU1-92P-201ENST00000517017 135 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 AL121890.5-201ENST00000620848 304 ntBASIC1.55□□□□□ -2.16
PAAF1Q9BRP4 RNU6-1067P-201ENST00000384752 107 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 U8.17-201ENST00000391292 132 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 AC245517.4-201ENST00000448601 281 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 SNORD123-201ENST00000459473 70 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 RPL30P7-201ENST00000479312 323 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 AC107027.2-201ENST00000512197 115 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 RNU6-830P-201ENST00000516353 107 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 SNORA74.3-201ENST00000517108 154 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 MIR4285-201ENST00000581001 85 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
PAAF1Q9BRP4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.53□□□□□ -2.16
PAAF1Q9BRP4 RNU6-888P-201ENST00000363010 101 ntBASIC1.53□□□□□ -2.16
PAAF1Q9BRP4 RNU6-682P-201ENST00000363843 106 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 212.2 ms