Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MIR1289-2-201ENST00000408360 111 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.81□□□□□ -2.12
VRK1Q99986 SNORA18.4-201ENST00000516440 124 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 Y_RNA.703-201ENST00000516846 111 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 AC112693.2-201ENST00000556538 232 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 MIR5002-201ENST00000584713 97 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 FAM106DP-201ENST00000586416 501 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 AL365434.2-201ENST00000607979 234 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 AC106754.2-201ENST00000623006 233 ntBASIC1.81□□□□□ -2.12
VRK1Q99986 Y_RNA.215-201ENST00000364204 112 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 RNU4-11P-201ENST00000365287 132 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 MIR676-201ENST00000390702 67 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 U8.17-201ENST00000391292 132 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 RNU6-588P-201ENST00000410281 105 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.8□□□□□ -2.12
VRK1Q99986 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
VRK1Q99986 SUMO1P3-201ENST00000439961 304 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 AC008834.1-201ENST00000511612 175 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 RNU6-322P-201ENST00000516010 103 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 MIR548X2-201ENST00000579776 100 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 AL513534.2-201ENST00000603836 250 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.8□□□□□ -2.12
VRK1Q99986 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.8□□□□□ -2.12
VRK1Q99986 SNORD33-201ENST00000362761 85 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 RNU6-818P-201ENST00000364837 108 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 SNORA1.2-201ENST00000365189 134 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 RNU6-938P-201ENST00000411285 103 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 SNORA74.3-201ENST00000517108 154 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.79□□□□□ -2.12
VRK1Q99986 MIR4524B-201ENST00000581569 115 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.79□□□□□ -2.12
VRK1Q99986 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VRK1Q99986 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
VRK1Q99986 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
VRK1Q99986 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
VRK1Q99986 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 RNU6-1189P-201ENST00000383958 107 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 MIR513C-201ENST00000401352 84 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 HSPE1P24-201ENST00000450782 238 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 AC092991.1-201ENST00000477176 376 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 RN7SL274P-201ENST00000492268 272 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
VRK1Q99986 AP003484.1-201ENST00000530974 250 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 MIR3133-201ENST00000583157 78 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 AC131055.1-201ENST00000584626 316 ntBASIC1.78□□□□□ -2.12
VRK1Q99986 Y_RNA.251-201ENST00000364551 99 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 Y_RNA.488-201ENST00000384403 102 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 SNORA40.5-201ENST00000391061 128 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 RPL31P63-201ENST00000422565 375 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.77□□□□□ -2.13
VRK1Q99986 RNU7-197P-201ENST00000458836 62 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 SNORD123-201ENST00000459473 70 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 MIR5197-201ENST00000583721 112 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.77□□□□□ -2.13
VRK1Q99986 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
VRK1Q99986 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-34-201ENST00000362441 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-12-201ENST00000362583 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-29-201ENST00000362834 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-9-201ENST00000362912 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-21-201ENST00000362963 81 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-14-201ENST00000363090 81 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-13-201ENST00000363358 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-41-201ENST00000363608 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-11-201ENST00000363616 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-5-201ENST00000363633 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-39-201ENST00000363694 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-4-201ENST00000363810 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-16-201ENST00000363887 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-6-201ENST00000363942 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-42-201ENST00000364273 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-15-201ENST00000364809 81 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-1-201ENST00000364961 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-26-201ENST00000365067 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-10-201ENST00000365073 81 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD50.2-201ENST00000365465 70 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-43-201ENST00000365503 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-36-201ENST00000365629 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 RNU6-1336P-201ENST00000383886 109 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 Y_RNA.497-201ENST00000384447 98 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 AC019129.1-201ENST00000403786 261 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 RNA5SP489-201ENST00000410986 109 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 AC079140.2-201ENST00000506193 142 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORA18.7-201ENST00000516910 131 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 SNORD115-40-201ENST00000606510 82 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 MIR8063-201ENST00000621930 81 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 WWP1P1-201ENST00000466609 2769 ntBASIC1.76□□□□□ -2.13
VRK1Q99986 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
VRK1Q99986 Y_RNA.343-201ENST00000365354 112 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 MIR569-201ENST00000385228 96 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 RNU1-78P-201ENST00000391248 165 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 AL591806.2-201ENST00000433122 173 ntBASIC1.75□□□□□ -2.13
VRK1Q99986 RNU6-346P-201ENST00000516288 111 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms