Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 SUMO1P3-201ENST00000439961 304 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 AC093850.1-201ENST00000454121 251 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU6-197P-201ENST00000516680 100 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU7-28P-201ENST00000516759 62 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 RNU6-902P-201ENST00000517212 91 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 MIR3144-201ENST00000579460 79 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 MIR2681-201ENST00000581814 105 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 AC120024.3-201ENST00000603167 156 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 AC103810.9-201ENST00000606688 112 ntBASIC1.11□□□□□ -2.23
ZIM3Q96PE6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AC245060.5-201ENST00000610778 3293 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.270-201ENST00000364693 104 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.272-201ENST00000364696 102 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU6-1062P-201ENST00000383908 107 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.398-201ENST00000383952 99 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 SNORD61-201ENST00000384252 73 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU6-125P-201ENST00000384505 107 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU6-768P-201ENST00000384683 107 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 MIR518F-201ENST00000384973 87 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 MIR660-201ENST00000385235 97 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.580-201ENST00000391004 95 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RN7SKP200-201ENST00000410564 320 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU2-55P-201ENST00000411146 174 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU6-938P-201ENST00000411285 103 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 PGBD4P5-201ENST00000445958 426 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.797-201ENST00000515977 94 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.662-201ENST00000516028 97 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU6-917P-201ENST00000516294 104 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 SNORD45.4-201ENST00000516629 73 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNA5SP481-201ENST00000516814 122 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AC090142.3-201ENST00000519012 385 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 MIR4709-201ENST00000577272 72 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AC104465.1-201ENST00000611365 139 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AC006441.5-201ENST00000612680 209 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AL513423.1-201ENST00000621695 132 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 AC027279.3-201ENST00000625055 122 ntBASIC1.1□□□□□ -2.23
ZIM3Q96PE6 RNU6-833P-201ENST00000363486 107 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU6-1082P-201ENST00000364574 107 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 SNORA1-201ENST00000384107 130 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU6-131P-201ENST00000391144 107 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 MLLT10P1-201ENST00000418346 262 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU7-197P-201ENST00000458836 62 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU7-34P-201ENST00000459394 64 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 AC005840.1-201ENST00000498412 377 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 CYCTP-201ENST00000504253 315 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU4-57P-201ENST00000515980 135 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU7-200P-201ENST00000516105 62 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNA5SP153-201ENST00000516498 76 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 JPX_2.1-201ENST00000614161 69 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 Pinc.1-201ENST00000616452 154 ntBASIC1.09□□□□□ -2.23
ZIM3Q96PE6 RNU6-888P-201ENST00000363010 101 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 RNU6-728P-201ENST00000365375 104 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 SNORA22-201ENST00000383907 134 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.432-201ENST00000384087 111 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 SNORA22C-201ENST00000384614 134 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 RNU6-239P-201ENST00000390990 99 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 RNU11-5P-201ENST00000391216 129 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 AL034345.1-201ENST00000407768 123 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 AC004965.1-201ENST00000413033 213 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 JTBP1-201ENST00000441314 247 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 AL121914.1-201ENST00000450188 156 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 RNU7-25P-201ENST00000516544 62 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 RNU2-60P-201ENST00000517290 128 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 MIR4778-201ENST00000577635 80 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 AC087685.1-201ENST00000587507 141 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 AL365434.2-201ENST00000607979 234 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.08□□□□□ -2.24
ZIM3Q96PE6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.08□□□□□ -2.24
ZIM3Q96PE6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
ZIM3Q96PE6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ZIM3Q96PE6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.251-201ENST00000364551 99 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 SNORD24-201ENST00000383884 75 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.494-201ENST00000384432 111 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 RNU2-7P-201ENST00000410794 178 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 snoU13.25-201ENST00000458945 104 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.07□□□□□ -2.24
ZIM3Q96PE6 AC092991.1-201ENST00000477176 376 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 RNU6-346P-201ENST00000516288 111 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.07□□□□□ -2.24
ZIM3Q96PE6 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 SNORA28-201ENST00000606769 126 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
ZIM3Q96PE6 AL121890.5-201ENST00000620848 304 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.07□□□□□ -2.24
ZIM3Q96PE6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 RNU6-774P-201ENST00000363238 107 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 RNU6-414P-201ENST00000363705 104 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 SNORA7.1-201ENST00000363750 139 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.06□□□□□ -2.24
ZIM3Q96PE6 Y_RNA.336-201ENST00000365307 109 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 295.1 ms