Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-1275P-201ENST00000391087 107 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 AC108667.1-201ENST00000428618 249 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 AC245517.4-201ENST00000448601 281 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 AL163195.1-201ENST00000496941 348 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNU6-970P-201ENST00000516312 107 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNU7-25P-201ENST00000516544 62 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNY4P20-201ENST00000516678 93 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 MIR4778-201ENST00000577635 80 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 AC021443.1-201ENST00000604478 211 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 MIR6845-201ENST00000613182 61 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 AL035470.1-201ENST00000622571 220 ntBASIC2.6□□□□□ -1.99
SHISA4Q96DD7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHISA4Q96DD7 RNU6-349P-201ENST00000362402 107 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 SNORA33-201ENST00000363664 130 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 RNU6-268P-201ENST00000364174 107 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 RNU1-133P-201ENST00000364867 167 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.336-201ENST00000365307 109 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.362-201ENST00000365518 110 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 RNU6-49P-201ENST00000384256 107 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 MIR221-201ENST00000385135 110 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SHISA4Q96DD7 RNA5SP482-201ENST00000391269 118 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 U8.17-201ENST00000391292 132 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 AL445646.1-201ENST00000431784 216 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.59□□□□□ -1.99
SHISA4Q96DD7 AC245060.5-201ENST00000610778 3293 ntBASIC2.59□□□□□ -2
SHISA4Q96DD7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
SHISA4Q96DD7 SNORA38-201ENST00000363946 132 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 RNU6-294P-201ENST00000364999 102 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 RNU6-443P-201ENST00000384780 107 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 SNORA26.2-201ENST00000390922 122 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 SNORA17.3-201ENST00000391159 129 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHISA4Q96DD7 RNU7-80P-201ENST00000459562 61 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 SNORD45.4-201ENST00000516629 73 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 RNU7-28P-201ENST00000516759 62 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 RNA5SP402-201ENST00000517148 110 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.58□□□□□ -2
SHISA4Q96DD7 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.58□□□□□ -2
SHISA4Q96DD7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHISA4Q96DD7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHISA4Q96DD7 Y_RNA.298-201ENST00000364960 107 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 RNY1P6-201ENST00000384193 109 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 SNRPGP14-201ENST00000435400 219 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 AC009238.1-201ENST00000442165 424 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 AC009237.6-201ENST00000446969 424 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 AC087499.4-201ENST00000448505 178 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 MIR5009-201ENST00000578736 100 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 MIR5002-201ENST00000584713 97 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 snoU13.31-201ENST00000607291 104 ntBASIC2.57□□□□□ -2
SHISA4Q96DD7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.57□□□□□ -2
SHISA4Q96DD7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
SHISA4Q96DD7 RNU6-862P-201ENST00000362804 105 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 Y_RNA.265-201ENST00000364677 108 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 RNU6-1131P-201ENST00000364955 107 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 Y_RNA.454-201ENST00000384224 113 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 RNU7-164P-201ENST00000459221 62 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.56□□□□□ -2
SHISA4Q96DD7 SNORD36C-201ENST00000516733 66 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 SNORA18.7-201ENST00000516910 131 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 SUMO2P16-201ENST00000519475 264 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 AC068339.1-201ENST00000526965 141 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.56□□□□□ -2
SHISA4Q96DD7 MIR219B-201ENST00000637023 88 ntBASIC2.56□□□□□ -2
SHISA4Q96DD7 WWP1P1-201ENST00000466609 2769 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 Y_RNA.351-201ENST00000365436 96 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHISA4Q96DD7 RNU6-573P-201ENST00000383938 106 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 Y_RNA.440-201ENST00000384120 114 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 SNORA51.10-201ENST00000384418 136 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 RNU6-440P-201ENST00000390882 105 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.55□□□□□ -2
SHISA4Q96DD7 AP003484.1-201ENST00000530974 250 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.55□□□□□ -2
SHISA4Q96DD7 AC062037.1-201ENST00000605302 128 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 MIR8070-201ENST00000616510 88 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 AL449363.1-201ENST00000617815 186 ntBASIC2.55□□□□□ -2
SHISA4Q96DD7 RNA5SP173-201ENST00000364857 136 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 Y_RNA.558-201ENST00000384685 113 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 MIR499A-201ENST00000384903 122 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 SNORA11.4-201ENST00000408823 129 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 RNU6-321P-201ENST00000410912 106 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 AC245047.3-201ENST00000429428 127 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 AC011753.1-201ENST00000451001 220 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.54□□□□□ -2
SHISA4Q96DD7 RNU6-830P-201ENST00000516353 107 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 RNU6-638P-201ENST00000516582 104 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 U4atac.1-201ENST00000618345 95 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 Y_RNA.818-201ENST00000618813 71 ntBASIC2.54□□□□□ -2
SHISA4Q96DD7 Y_RNA.78-201ENST00000362970 110 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 RNA5SP493-201ENST00000364115 91 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 RNU6-461P-201ENST00000364195 107 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 AL627390.1-201ENST00000396055 340 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 MIR1262-201ENST00000408276 93 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 AC084364.2-201ENST00000546924 395 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 MIR3683-201ENST00000580847 82 ntBASIC2.53□□□□□ -2
SHISA4Q96DD7 MIR3163-201ENST00000581592 73 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms