Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 SNRPGP14-201ENST00000435400 219 ntBASIC1.44□□□□□ -2.18
SH3KBP1Q96B97 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
SH3KBP1Q96B97 RN7SKP164-201ENST00000516138 266 ntBASIC1.44□□□□□ -2.18
SH3KBP1Q96B97 RNU6-1271P-201ENST00000517049 105 ntBASIC1.44□□□□□ -2.18
SH3KBP1Q96B97 RNU6-165P-201ENST00000517170 99 ntBASIC1.44□□□□□ -2.18
SH3KBP1Q96B97 MIR8065-201ENST00000620577 100 ntBASIC1.44□□□□□ -2.18
SH3KBP1Q96B97 Y_RNA.199-201ENST00000364014 102 ntBASIC1.43□□□□□ -2.18
SH3KBP1Q96B97 Y_RNA.626-201ENST00000411288 95 ntBASIC1.43□□□□□ -2.18
SH3KBP1Q96B97 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.43□□□□□ -2.18
SH3KBP1Q96B97 Y_RNA.188-201ENST00000363952 111 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 RNU4-17P-201ENST00000365598 141 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 MIR570-201ENST00000384917 97 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 MIR15B-201ENST00000385045 98 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 SNORD123-201ENST00000459473 70 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 SNORD77.4-201ENST00000516158 81 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 SNORD111.1-201ENST00000516421 86 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 RNU7-181P-201ENST00000517234 74 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 AC019288.1-201ENST00000557918 224 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.42□□□□□ -2.18
SH3KBP1Q96B97 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 SNORA7.1-201ENST00000363750 139 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 Y_RNA.401-201ENST00000383965 117 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 SNORA70.7-201ENST00000384159 133 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 MIR520C-201ENST00000385005 87 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 RNU6-1228P-201ENST00000391014 107 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 RNU6-381P-201ENST00000391259 108 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 RPL39P39-201ENST00000455840 151 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 RNU6-561P-201ENST00000516222 102 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 RNU7-25P-201ENST00000516544 62 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 SNORA74.3-201ENST00000517108 154 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 MIR5688-201ENST00000580619 83 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 RNU2-4P-201ENST00000606190 192 ntBASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.41□□□□□ -2.18
SH3KBP1Q96B97 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.18
SH3KBP1Q96B97 Y_RNA.466-201ENST00000384294 113 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.489-201ENST00000384410 101 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 MIR616-201ENST00000385293 97 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 SNORD28B-201ENST00000390993 75 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 MIR548O-201ENST00000408583 114 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 SNRPGP8-201ENST00000454064 226 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 snoU13.18-201ENST00000459483 104 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 COX6CP14-201ENST00000469580 174 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 AC048334.1-201ENST00000477975 159 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 AL096861.1-201ENST00000610899 123 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.4□□□□□ -2.19
SH3KBP1Q96B97 RNU6-1138P-201ENST00000365359 106 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU2-70P-201ENST00000410718 179 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU6-693P-201ENST00000516134 107 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU4-71P-201ENST00000516258 113 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU6-1299P-201ENST00000516316 100 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU6-388P-201ENST00000517012 105 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU6-389P-201ENST00000517048 105 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 RNU6-1270P-201ENST00000517128 108 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 MIR548AR-201ENST00000582191 57 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 MIR3192-201ENST00000584920 77 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 AC006441.5-201ENST00000612680 209 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 AL157834.3-201ENST00000615543 103 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 AC078938.1-201ENST00000620993 318 ntBASIC1.39□□□□□ -2.19
SH3KBP1Q96B97 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.91-201ENST00000363042 107 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.547-201ENST00000384654 119 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 U8.17-201ENST00000391292 132 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 RNU7-41P-201ENST00000515917 61 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 SNORA31.2-201ENST00000516019 134 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 MIR4764-201ENST00000580680 88 ntBASIC1.38□□□□□ -2.19
SH3KBP1Q96B97 SNORA25.3-201ENST00000363205 127 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 RNU6-379P-201ENST00000363813 104 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 SNORD45.3-201ENST00000363836 72 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 SNORD58.1-201ENST00000391313 66 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.618-201ENST00000410949 107 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 RNU6-365P-201ENST00000517113 106 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 MIR4308-201ENST00000580634 81 ntBASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.200-201ENST00000364018 102 ntBASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.432-201ENST00000384087 111 ntBASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 SNORD61-201ENST00000384252 73 ntBASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 AL121914.1-201ENST00000450188 156 ntBASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 MIR4662B-201ENST00000579498 81 ntBASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.83-201ENST00000363005 113 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.634-201ENST00000364811 113 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 RNU6-484P-201ENST00000384016 107 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 snoU13.25-201ENST00000458945 104 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 Y_RNA.797-201ENST00000515977 94 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 AC007751.1-201ENST00000529260 376 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 MIR4744-201ENST00000581563 82 ntBASIC1.35□□□□□ -2.19
SH3KBP1Q96B97 AL078603.1-201ENST00000603824 313 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 261.5 ms