Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.53□□□□□ -2.65
SPTSSAQ969W0 RNU6-938P-201ENST00000411285 103 ntBASIC-1.53□□□□□ -2.65
SPTSSAQ969W0 Y_RNA.654-201ENST00000497848 106 ntBASIC-1.53□□□□□ -2.65
SPTSSAQ969W0 SNORD38.3-201ENST00000516599 73 ntBASIC-1.53□□□□□ -2.65
SPTSSAQ969W0 RNU6-86P-201ENST00000606534 107 ntBASIC-1.53□□□□□ -2.65
SPTSSAQ969W0 RNU6-502P-201ENST00000362419 108 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.533-201ENST00000384596 114 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 SNORD77.3-201ENST00000391113 65 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 MTND2P9-201ENST00000422293 931 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 MTND3P21-201ENST00000433774 331 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 MTATP6P13-201ENST00000438531 667 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 AL033528.1-201ENST00000453780 140 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 RNU6-531P-201ENST00000516694 104 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 MIR6717-201ENST00000622747 73 ntBASIC-1.54□□□□□ -2.66
SPTSSAQ969W0 SNORD113-6-201ENST00000363345 75 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 RNU6-595P-201ENST00000363944 107 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 RNU6-879P-201ENST00000364328 108 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 RNU6-900P-201ENST00000384498 102 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 RNU6-901P-201ENST00000384593 106 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 MIR517A-201ENST00000385001 87 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 SNORA40.3-201ENST00000390964 122 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 RNU6-721P-201ENST00000410155 105 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 MTND1P11-201ENST00000456661 876 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 SCARNA17-201ENST00000516183 144 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 SNORA18.6-201ENST00000516792 115 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 AC245884.10-201ENST00000597355 337 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 AP003357.1-201ENST00000604497 148 ntBASIC-1.55□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 RNU6-128P-201ENST00000383976 107 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 RNU6-38P-201ENST00000384085 107 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 RNU6-906P-201ENST00000384700 70 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 SNORA26.6-201ENST00000391256 115 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 AC055872.1-201ENST00000570978 278 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 MIR4473-201ENST00000583731 91 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 AC018638.8-201ENST00000588755 281 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 AL158050.2-201ENST00000605336 568 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 AL354950.2-201ENST00000617939 290 ntBASIC-1.56□□□□□ -2.66
SPTSSAQ969W0 RNU6-653P-201ENST00000363074 106 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 SNORD114-29-201ENST00000364819 70 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 MIR539-201ENST00000365690 78 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 RNU6-30P-201ENST00000384561 107 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 RNU6-95P-201ENST00000384697 107 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 AL500527.2-201ENST00000454105 95 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 snoU13.11-201ENST00000459219 104 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 MIR2681-201ENST00000581814 105 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 AL021368.1-201ENST00000607490 540 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 uc_338.10-201ENST00000621872 182 ntBASIC-1.57□□□□□ -2.66
SPTSSAQ969W0 MTND5P18-201ENST00000445624 1801 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 SNORD115-28-201ENST00000363931 81 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 RNY3P5-201ENST00000384127 102 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 RNU6-318P-201ENST00000384283 103 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 RNU6-297P-201ENST00000384636 107 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 AL603914.1-201ENST00000401964 204 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 MIR1278-201ENST00000408753 81 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 SNORD11-201ENST00000459124 84 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 DEFB131E-201ENST00000532329 154 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 AC127455.1-201ENST00000565496 145 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 uc_338.19-201ENST00000616808 99 ntBASIC-1.58□□□□□ -2.66
SPTSSAQ969W0 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 RNU4-58P-201ENST00000363192 141 ntBASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 MTND1P14-201ENST00000427400 950 ntBASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 RNU6-436P-201ENST00000516171 114 ntBASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 AC091931.1-201ENST00000623488 728 ntBASIC-1.59□□□□□ -2.66
SPTSSAQ969W0 RNU4-66P-201ENST00000365199 138 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 SNORD115-44-201ENST00000365391 82 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 FCF1P4-201ENST00000448326 183 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 RNU7-96P-201ENST00000459535 64 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 MIR3179-1-201ENST00000578940 84 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 MIR3179-2-201ENST00000579107 84 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 MIR3179-3-201ENST00000579566 84 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 MIR4499-201ENST00000584834 69 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 AC060780.3-201ENST00000589464 80 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 MIR3179-4-201ENST00000617599 84 ntBASIC-1.6□□□□□ -2.67
SPTSSAQ969W0 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 MIR626-201ENST00000385032 94 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 RNU6-1158P-201ENST00000391167 107 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 AC074085.1-201ENST00000413598 418 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 RNU6-274P-201ENST00000459566 107 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 RNU6-998P-201ENST00000515894 101 ntBASIC-1.61□□□□□ -2.67
SPTSSAQ969W0 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms