Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 MRPS18CP4-201ENST00000535821 231 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 AL365434.2-201ENST00000607979 234 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 AC004792.1-201ENST00000614523 137 ntBASIC1.81□□□□□ -2.12
HPS3Q969F9 Y_RNA.634-201ENST00000364811 113 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 MIR526A1-201ENST00000384897 85 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 AC245517.4-201ENST00000448601 281 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 RNU6-561P-201ENST00000516222 102 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 AC019176.1-201ENST00000518519 225 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 MIR4781-201ENST00000585250 76 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 AC015726.2-201ENST00000620112 122 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 U6.106-201ENST00000636360 105 ntBASIC1.8□□□□□ -2.12
HPS3Q969F9 RNU6-312P-201ENST00000364629 107 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 SNORD24-201ENST00000383884 75 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 Y_RNA.412-201ENST00000384001 104 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 MIR548O-201ENST00000408583 114 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 AC027119.1-201ENST00000440877 241 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 Y_RNA.666-201ENST00000516187 112 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 RNU6-830P-201ENST00000516353 107 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 AC022559.1-201ENST00000520905 205 ntBASIC1.79□□□□□ -2.12
HPS3Q969F9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.79□□□□□ -2.12
HPS3Q969F9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
HPS3Q969F9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
HPS3Q969F9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HPS3Q969F9 Y_RNA.23-201ENST00000362496 106 ntBASIC1.78□□□□□ -2.12
HPS3Q969F9 RNY1P10-201ENST00000363268 113 ntBASIC1.78□□□□□ -2.12
HPS3Q969F9 MIR1287-201ENST00000408492 90 ntBASIC1.78□□□□□ -2.12
HPS3Q969F9 RNA5SP445-201ENST00000515889 115 ntBASIC1.78□□□□□ -2.12
HPS3Q969F9 RNU6-693P-201ENST00000516134 107 ntBASIC1.78□□□□□ -2.12
HPS3Q969F9 AL357312.1-201ENST00000603879 298 ntBASIC1.78□□□□□ -2.12
HPS3Q969F9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.77□□□□□ -2.13
HPS3Q969F9 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 RPL30P7-201ENST00000479312 323 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 Y_RNA.662-201ENST00000516028 97 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 RNU6-1219P-201ENST00000516143 112 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 RNU6-922P-201ENST00000516753 99 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 AC097639.2-201ENST00000603159 172 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 MIR502-201ENST00000606349 86 ntBASIC1.77□□□□□ -2.13
HPS3Q969F9 Y_RNA.91-201ENST00000363042 107 ntBASIC1.76□□□□□ -2.13
HPS3Q969F9 RNU6-643P-201ENST00000384018 107 ntBASIC1.76□□□□□ -2.13
HPS3Q969F9 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
HPS3Q969F9 RNU7-25P-201ENST00000516544 62 ntBASIC1.76□□□□□ -2.13
HPS3Q969F9 MIR4431-201ENST00000579990 94 ntBASIC1.76□□□□□ -2.13
HPS3Q969F9 GHRLOS.1-201ENST00000610995 70 ntBASIC1.76□□□□□ -2.13
HPS3Q969F9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HPS3Q969F9 RNU6-888P-201ENST00000363010 101 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 SNORD61-201ENST00000384252 73 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HPS3Q969F9 SNORA17.3-201ENST00000391159 129 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.75□□□□□ -2.13
HPS3Q969F9 RNU6-861P-201ENST00000516745 106 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 SNORA18.7-201ENST00000516910 131 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 MIR378D2-201ENST00000580636 98 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 AL121890.5-201ENST00000620848 304 ntBASIC1.75□□□□□ -2.13
HPS3Q969F9 Y_RNA.66-201ENST00000362862 102 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 Y_RNA.240-201ENST00000364469 95 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 SNORA1.2-201ENST00000365189 134 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 RNU6-997P-201ENST00000384725 107 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 RNU6-321P-201ENST00000410912 106 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 BTF3P4-201ENST00000418852 495 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 SNORD116-25-201ENST00000516517 92 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 SNORA74.3-201ENST00000517108 154 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 RNU6-1270P-201ENST00000517128 108 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 RNU6-902P-201ENST00000517212 91 ntBASIC1.74□□□□□ -2.13
HPS3Q969F9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HPS3Q969F9 SNORD115-28-201ENST00000363931 81 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 U8.17-201ENST00000391292 132 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 AC006461.1-201ENST00000412637 326 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 SNORD123-201ENST00000459473 70 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 AC005840.1-201ENST00000498412 377 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 RNU6-970P-201ENST00000516312 107 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 MIR4255-201ENST00000579351 72 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 AL359821.1-201ENST00000605519 182 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 AC134878.1-201ENST00000619901 243 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 AL442644.1-201ENST00000454390 3105 ntBASIC1.73□□□□□ -2.13
HPS3Q969F9 Y_RNA.270-201ENST00000364693 104 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 RNU2-64P-201ENST00000411315 191 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.72□□□□□ -2.13
HPS3Q969F9 AC087499.4-201ENST00000448505 178 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 RPL39P39-201ENST00000455840 151 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 AC107027.2-201ENST00000512197 115 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 RNU7-43P-201ENST00000516554 64 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 AC098479.1-201ENST00000609225 154 ntBASIC1.72□□□□□ -2.13
HPS3Q969F9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
HPS3Q969F9 RNU6-682P-201ENST00000363843 106 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 Y_RNA.521-201ENST00000384560 114 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 MIR520C-201ENST00000385005 87 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 SNORD41-201ENST00000386967 70 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 SEPT7P4-201ENST00000437076 306 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 AC107297.1-201ENST00000459991 176 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 TRMT112P2-201ENST00000512910 132 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 AL512310.8-201ENST00000550183 120 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 MIR3664-201ENST00000579074 99 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
HPS3Q969F9 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms