| ASAP3 | Q8TDY4 | SNORA51.10-201 | ENST00000384418 | 136 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | Y_RNA.494-201 | ENST00000384432 | 111 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AL034345.1-201 | ENST00000407768 | 123 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | MIR3163-201 | ENST00000581592 | 73 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORD115-40-201 | ENST00000606510 | 82 nt | BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | GPR22-201 | ENST00000304402 | 2942 nt | APPRIS P1 TSL 1 (best) BASIC | 2.75 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | ATP11C-201 | ENST00000327569 | 6115 nt | APPRIS P3 TSL 1 (best) BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | MIR6073-201 | ENST00000352083 | 89 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNA5SP289-201 | ENST00000362332 | 137 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | Y_RNA.241-201 | ENST00000364470 | 117 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU6-950P-201 | ENST00000384651 | 107 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU11-3P-201 | ENST00000391111 | 133 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU7-96P-201 | ENST00000459535 | 64 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 2.74 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | KTN1-207 | ENST00000438792 | 4449 nt | APPRIS ALT2 TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | LCORL-202 | ENST00000382224 | 4984 nt | APPRIS ALT2 TSL 5 BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU4-16P-201 | ENST00000364737 | 141 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNORA4.2-201 | ENST00000365313 | 147 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | Y_RNA.544-201 | ENST00000384650 | 113 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SNX2P2-201 | ENST00000424553 | 323 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AL035398.1-201 | ENST00000430869 | 322 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | LINC02514-201 | ENST00000509058 | 498 nt | TSL 3 BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AC090821.2-201 | ENST00000523552 | 176 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SPTSSB-205 | ENST00000620149 | 231 nt | APPRIS P1 BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | SLITRK6-201 | ENST00000400286 | 4318 nt | APPRIS P1 TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RICTOR-202 | ENST00000357387 | 9543 nt | APPRIS P1 TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | ICE2P2-201 | ENST00000483823 | 2787 nt | BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | AC011124.2-201 | ENST00000518739 | 3222 nt | TSL 1 (best) BASIC | 2.73 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | MIR342-201 | ENST00000362212 | 99 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | Y_RNA.78-201 | ENST00000362970 | 110 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNA5SP126-201 | ENST00000365092 | 109 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNU6-1031P-201 | ENST00000384773 | 107 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | TRAJ26-201 | ENST00000390511 | 60 nt | APPRIS P1 BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNA5SP144-201 | ENST00000410846 | 116 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | HMGN2P3-201 | ENST00000433603 | 273 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | HMGN2P5-201 | ENST00000436882 | 273 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNVU1-2-201 | ENST00000516326 | 135 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | IGLV3-17-201 | ENST00000519099 | 244 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | MIR5092-201 | ENST00000583139 | 88 nt | BASIC | 2.72 | □□□□□ -1.97 | | |
| ASAP3 | Q8TDY4 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIR518A2-201 | ENST00000384966 | 87 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIR590-201 | ENST00000385008 | 97 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNA5SP465-201 | ENST00000391195 | 109 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORA11.2-201 | ENST00000408318 | 127 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC092783.1-201 | ENST00000435832 | 231 nt | TSL 3 BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORA40.13-201 | ENST00000516379 | 120 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SCARNA16.3-201 | ENST00000516595 | 184 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORA31.15-201 | ENST00000516771 | 132 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU7-181P-201 | ENST00000517234 | 74 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AL162726.3-218 | ENST00000636401 | 95 nt | BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | OGN-202 | ENST00000375561 | 2743 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | CFH-202 | ENST00000367429 | 4127 nt | APPRIS P1 TSL 1 (best) BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.71 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORD56.5-201 | ENST00000364281 | 72 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORA48.1-201 | ENST00000390879 | 135 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNA5SP181-201 | ENST00000410246 | 98 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | HOTAIRM1_4.1-201 | ENST00000617934 | 102 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | Y_RNA.818-201 | ENST00000618813 | 71 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC021613.1-201 | ENST00000623880 | 111 nt | BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | NAALADL2-203 | ENST00000454872 | 9865 nt | APPRIS P1 TSL 1 (best) BASIC | 2.7 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIPOL1-203 | ENST00000537471 | 5954 nt | APPRIS P1 TSL 5 BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | HMGN2P39-201 | ENST00000398005 | 273 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIR1302-4-201 | ENST00000408701 | 150 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORA19.1-201 | ENST00000410656 | 129 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNA5SP492-201 | ENST00000411330 | 114 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU7-12P-201 | ENST00000516030 | 62 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SUB1P4-201 | ENST00000566062 | 339 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC092881.1-201 | ENST00000638218 | 2733 nt | BASIC | 2.69 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC003984.1-201 | ENST00000450977 | 4104 nt | TSL 1 (best) BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | PCM1-222 | ENST00000524226 | 5955 nt | TSL 1 (best) BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU2-11P-201 | ENST00000459191 | 187 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC234781.5-201 | ENST00000508429 | 271 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU6-904P-201 | ENST00000516206 | 101 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU6-109P-201 | ENST00000516364 | 107 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU6-184P-201 | ENST00000516514 | 107 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU6-158P-201 | ENST00000517104 | 100 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNA5SP402-201 | ENST00000517148 | 110 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNA5SP437-201 | ENST00000517249 | 129 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.68 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC025539.1-201 | ENST00000515343 | 4019 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AP003174.1-201 | ENST00000306533 | 376 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU6-296P-201 | ENST00000384608 | 107 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIR520A-201 | ENST00000384862 | 85 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | ATP6V0E1P1-201 | ENST00000412537 | 226 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | POLR2J4-204 | ENST00000418424 | 324 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AL512326.2-201 | ENST00000426359 | 151 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RPS23P4-201 | ENST00000487908 | 423 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | RNU7-6P-201 | ENST00000516845 | 62 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC004812.1-201 | ENST00000540773 | 146 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | MIR4658-201 | ENST00000584344 | 65 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC103810.6-201 | ENST00000606708 | 136 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AL137847.3-201 | ENST00000611521 | 109 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | AC087741.2-201 | ENST00000619415 | 172 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | NEDD4-205 | ENST00000506154 | 6751 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| ASAP3 | Q8TDY4 | SAGE1-202 | ENST00000370709 | 2879 nt | APPRIS P2 TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |