Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC083798.1-201ENST00000472671 131 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 RNA5SP401-201ENST00000515920 127 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 MIR5701-3-201ENST00000578890 82 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 MIR5701-1-201ENST00000585138 82 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 AC138207.3-201ENST00000585289 166 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 MIR5701-2-201ENST00000615634 82 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 AL603755.1-201ENST00000619504 163 ntBASIC-0.1□□□□□ -2.42
SYNE1Q8NF91 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 SNORA22B-201ENST00000383876 138 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MIR570-201ENST00000384917 97 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-332P-201ENST00000391193 108 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU2-66P-201ENST00000410650 161 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MTCO2P27-201ENST00000420740 428 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU7-4P-201ENST00000516961 62 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MIR4528-201ENST00000577763 90 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MIR3672-201ENST00000584290 82 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC018638.8-201ENST00000588755 281 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC087752.4-201ENST00000605911 462 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC005014.3-201ENST00000605985 190 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC007485.1-201ENST00000616755 206 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU4-84P-201ENST00000364200 139 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MIR496-201ENST00000385226 102 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MT-TF-201ENST00000387314 71 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNA5SP163-201ENST00000410304 99 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 USP9YP30-201ENST00000430729 455 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AL445567.1-201ENST00000439121 144 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RPS29P15-201ENST00000458329 171 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MIR342-201ENST00000362212 99 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-693P-201ENST00000516134 107 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-436P-201ENST00000516171 114 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC040904.1-201ENST00000590850 223 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC011921.3-201ENST00000605540 361 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC022140.2-201ENST00000623500 188 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-595P-201ENST00000363944 107 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-136P-201ENST00000384663 107 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-159P-201ENST00000391080 106 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AL603910.2-201ENST00000407268 136 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-126P-201ENST00000516685 103 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MIR548AD-201ENST00000584780 82 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU1-29P-201ENST00000606574 126 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC244669.1-204ENST00000621564 178 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 SNORD78.2-201ENST00000391076 69 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-879P-201ENST00000364328 108 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-648P-201ENST00000410190 107 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC069271.1-201ENST00000445577 156 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 MTND1P17-201ENST00000448961 204 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU7-187P-201ENST00000458985 68 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 ACA59.1-201ENST00000515966 143 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.666-201ENST00000516187 112 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 AC245008.1-201ENST00000608123 476 ntBASIC-0.1□□□□□ -2.43
SYNE1Q8NF91 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-553P-201ENST00000364047 96 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNA5SP192-201ENST00000364404 120 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU4-66P-201ENST00000365199 138 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 SNORD116-11-201ENST00000383882 92 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-601P-201ENST00000384540 107 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-248P-201ENST00000410720 107 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 MTND1P14-201ENST00000427400 950 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU2-60P-201ENST00000517290 128 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 MIR4441-201ENST00000582623 100 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 MIR6738-201ENST00000619620 64 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.361-201ENST00000365515 120 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 SNORD41.1-201ENST00000391000 69 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNA5SP237-201ENST00000410414 113 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNA5SP261-201ENST00000410536 106 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-893P-201ENST00000458841 100 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU7-102P-201ENST00000458948 62 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-966P-201ENST00000516479 104 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 SNORA70.25-201ENST00000612741 95 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 MIR302B-201ENST00000362188 73 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-874P-201ENST00000362390 105 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU4-16P-201ENST00000364737 141 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-318P-201ENST00000384283 103 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 MIR588-201ENST00000384900 83 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 MIR125B2-201ENST00000385128 89 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-274P-201ENST00000459566 107 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNA5SP180-201ENST00000516181 101 ntBASIC-0.11□□□□□ -2.43
SYNE1Q8NF91 RNU6-1332P-201ENST00000516666 104 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms