Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AC011406.1-201ENST00000512440 370 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 AC097462.1-201ENST00000514125 324 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 RNU1-104P-201ENST00000517280 175 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 MIR3126-201ENST00000577443 74 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 MIR3169-201ENST00000578032 83 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 AL365205.2-201ENST00000594586 68 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 MIR6895-201ENST00000613497 78 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 Pinc.1-201ENST00000616452 154 ntBASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMRP1Q8NCR6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 RNU4-13P-201ENST00000364019 141 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 Y_RNA.366-201ENST00000365540 102 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 SNORD12C-201ENST00000386307 89 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 SNORD72-201ENST00000390994 80 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 SNORA19.1-201ENST00000410656 129 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 RNA5SP127-201ENST00000411051 133 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 RNU7-95P-201ENST00000459222 64 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 IGLV3-17-201ENST00000519099 244 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 AC011604.1-201ENST00000545978 196 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 MIR5694-201ENST00000581190 76 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 AP001318.4-201ENST00000616637 121 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 U6.73-201ENST00000619194 103 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 AC106754.2-201ENST00000623006 233 ntBASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
SMRP1Q8NCR6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 RNA5SP493-201ENST00000364115 91 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 RNU6-1138P-201ENST00000365359 106 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 Y_RNA.346-201ENST00000365385 112 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 SNORD61-201ENST00000384252 73 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 AL117342.1-201ENST00000404861 406 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 MIR1302-4-201ENST00000408701 150 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 snoU13.18-201ENST00000459483 104 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 MRPS17P9-201ENST00000511924 393 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 SNORA18.4-201ENST00000516440 124 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 SCARNA15-202ENST00000516881 127 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 RNU6-1270P-201ENST00000517128 108 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 AC007012.1-201ENST00000567192 175 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 BX248123.2-201ENST00000606318 124 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 AL512598.1-201ENST00000610158 273 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 MIR338-201ENST00000636369 67 ntBASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMRP1Q8NCR6 RNU6-766P-201ENST00000362478 107 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 Y_RNA.163-201ENST00000363702 113 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNU6-294P-201ENST00000364999 102 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 SNORD18B-201ENST00000365659 72 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNU6-756P-201ENST00000383997 107 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNY1P7-201ENST00000384743 110 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 MIR515-2-201ENST00000384883 83 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 MIR515-1-201ENST00000384884 83 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 SNORA12.1-201ENST00000390873 148 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 AF228730.3-201ENST00000436691 102 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 HMGN2P34-201ENST00000437647 269 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNU6-109P-201ENST00000516364 107 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNU6-184P-201ENST00000516514 107 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNU7-128P-201ENST00000517247 62 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 AC062037.1-201ENST00000605302 128 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SMRP1Q8NCR6 RNU1-52P-201ENST00000384190 164 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 SNORD77.3-201ENST00000391113 65 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 HMGN2P39-201ENST00000398005 273 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 OR9P1P-201ENST00000496431 281 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 RNU6-1149P-201ENST00000516810 97 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 RNU7-172P-201ENST00000517125 64 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 AC005786.1-201ENST00000588553 154 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 AC022202.1-201ENST00000613515 211 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.87□□□□□ -2.11
SMRP1Q8NCR6 AC005336.3-201ENST00000623833 2679 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 SNORA33-201ENST00000363664 130 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 MIR570-201ENST00000384917 97 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 MIR1253-201ENST00000408273 105 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 MIR1283-2-201ENST00000408621 87 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 CST2P1-201ENST00000425770 87 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 RPL39P34-201ENST00000477141 156 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 RNU7-99P-201ENST00000516271 62 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 AC024995.1-201ENST00000523014 93 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 AC121758.2-201ENST00000553271 193 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 AL591926.4-201ENST00000616895 298 ntBASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SMRP1Q8NCR6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SMRP1Q8NCR6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms