Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 Y_RNA.435-201ENST00000384095 112 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 Y_RNA.515-201ENST00000384535 112 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 Y_RNA.571-201ENST00000384753 98 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 SNRPGP8-201ENST00000454064 226 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 RNA5SP153-201ENST00000516498 76 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 SNORA74.3-201ENST00000517108 154 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 AL160236.1-201ENST00000556317 195 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 MIR4744-201ENST00000581563 82 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 AC097639.2-201ENST00000603159 172 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
CCDC33Q8N5R6 Y_RNA.274-201ENST00000364714 101 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 SNORD24-201ENST00000383884 75 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 RNU6-918P-201ENST00000391219 106 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 MIR548O-201ENST00000408583 114 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 RNU4-43P-201ENST00000410628 137 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 SNRPGP13-201ENST00000442212 177 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 SNORD123-201ENST00000459473 70 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 Y_RNA.666-201ENST00000516187 112 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 RNU7-25P-201ENST00000516544 62 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 RNU2-4P-201ENST00000606190 192 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 AC015726.2-201ENST00000620112 122 ntBASIC1.6□□□□□ -2.15
CCDC33Q8N5R6 RNU6-728P-201ENST00000365375 104 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 RNU6-578P-201ENST00000390980 103 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 SNORA26-201ENST00000391286 122 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 RNU4-57P-201ENST00000515980 135 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 SNORD111.1-201ENST00000516421 86 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 RNU1-92P-201ENST00000517017 135 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 AC108706.1-201ENST00000611053 297 ntBASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CCDC33Q8N5R6 Y_RNA.66-201ENST00000362862 102 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.91-201ENST00000363042 107 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.634-201ENST00000364811 113 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.327-201ENST00000365201 102 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.547-201ENST00000384654 119 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 RNU6-561P-201ENST00000516222 102 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 RN7SKP88-201ENST00000516847 250 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 SNORA18.7-201ENST00000516910 131 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 RNU6-365P-201ENST00000517113 106 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 AC109810.1-201ENST00000534066 224 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 7SK.8-201ENST00000612110 250 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 7SK.11-201ENST00000615477 250 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 7SK.13-201ENST00000622040 250 ntBASIC1.58□□□□□ -2.16
CCDC33Q8N5R6 RNU6-888P-201ENST00000363010 101 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 RNU6-1020P-201ENST00000363684 107 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 SNORA7.1-201ENST00000363750 139 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.257-201ENST00000364596 102 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 RNU6-200P-201ENST00000364743 107 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 SNORA25.9-201ENST00000365087 128 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 MIR499A-201ENST00000384903 122 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 MIR548A2-201ENST00000384956 97 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 RNU7-43P-201ENST00000516554 64 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 RNU6-197P-201ENST00000516680 100 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 AC007751.1-201ENST00000529260 376 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 AP001485.1-201ENST00000604799 199 ntBASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC33Q8N5R6 RNU6-47P-201ENST00000383866 107 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 SNORD61-201ENST00000384252 73 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 RNU4-70P-201ENST00000384579 139 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 MIR518F-201ENST00000384973 87 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 RNU2-70P-201ENST00000410718 179 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 RNU6-847P-201ENST00000411115 108 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 RNU6-504P-201ENST00000516568 104 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 AL096861.1-201ENST00000610899 123 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 MIR7111-201ENST00000619751 72 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC33Q8N5R6 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.182-201ENST00000363880 111 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.297-201ENST00000364950 91 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 U8.17-201ENST00000391292 132 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 MIR4764-201ENST00000580680 88 ntBASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.75-201ENST00000362927 97 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.644-201ENST00000459006 113 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 RNU6-138P-201ENST00000515952 107 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.797-201ENST00000515977 94 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 RNU6-693P-201ENST00000516134 107 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.674-201ENST00000516362 113 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 Y_RNA.700-201ENST00000516806 100 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 MIR548AR-201ENST00000582191 57 ntBASIC1.54□□□□□ -2.16
CCDC33Q8N5R6 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms