Protein–RNA interactions for Protein: Q8IYE1

CCDC13, Coiled-coil domain-containing protein 13, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13Q8IYE1 MIR4662B-201ENST00000579498 81 ntBASIC1.35□□□□□ -2.19
CCDC13Q8IYE1 AL391903.3-201ENST00000612158 163 ntBASIC1.35□□□□□ -2.19
CCDC13Q8IYE1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
CCDC13Q8IYE1 Y_RNA.54-201ENST00000362766 105 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 Y_RNA.307-201ENST00000365022 117 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 Y_RNA.447-201ENST00000384184 113 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 RNU2-55P-201ENST00000411146 174 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 RNA5SP220-201ENST00000516298 104 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 RNU6-126P-201ENST00000516685 103 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 SNORA74.3-201ENST00000517108 154 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 MIR3128-201ENST00000581957 66 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 AL049861.1-201ENST00000603130 150 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC13Q8IYE1 Y_RNA.262-201ENST00000364641 102 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 MIR616-201ENST00000385293 97 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 RNU6-381P-201ENST00000391259 108 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CCDC13Q8IYE1 snoU2_19.4-201ENST00000364329 80 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 RNU4-71P-201ENST00000516258 113 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.60-201ENST00000362831 98 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 SNORD27-201ENST00000363981 72 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 RNU4-17P-201ENST00000365598 141 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 MT-TG-201ENST00000387429 68 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 MIR802-201ENST00000390235 94 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 RNU6-1228P-201ENST00000391014 107 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 SNORA40.6-201ENST00000391153 128 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 RN7SKP164-201ENST00000516138 266 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 RNU7-43P-201ENST00000516554 64 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 Pinc.1-201ENST00000616452 154 ntBASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC13Q8IYE1 RNU6-53P-201ENST00000365367 106 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.477-201ENST00000384352 108 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.587-201ENST00000391210 103 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 SNORD123-201ENST00000459473 70 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 SCARNA8-201ENST00000515924 131 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 RNU4-57P-201ENST00000515980 135 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 SNORD111.1-201ENST00000516421 86 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 AC097639.2-201ENST00000603159 172 ntBASIC1.3□□□□□ -2.2
CCDC13Q8IYE1 SNORA20.1-201ENST00000364790 130 ntBASIC1.29□□□□□ -2.2
CCDC13Q8IYE1 SNORD114-22-201ENST00000365423 72 ntBASIC1.29□□□□□ -2.2
CCDC13Q8IYE1 RNU6-484P-201ENST00000384016 107 ntBASIC1.29□□□□□ -2.2
CCDC13Q8IYE1 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
CCDC13Q8IYE1 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
CCDC13Q8IYE1 RNU6-103P-201ENST00000363686 107 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 SNORD24-201ENST00000383884 75 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.486-201ENST00000384398 107 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.618-201ENST00000410949 107 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 RPL39P39-201ENST00000455840 151 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 RNA5SP153-201ENST00000516498 76 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 RNU6-111P-201ENST00000517179 105 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 MIR4764-201ENST00000580680 88 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 RMST_2.1-201ENST00000617263 136 ntBASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC13Q8IYE1 Y_RNA.65-201ENST00000362846 100 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 Y_RNA.401-201ENST00000383965 117 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 MT-TT-201ENST00000387460 66 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 MIR1285-1-201ENST00000408593 84 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 AC245047.7-201ENST00000440265 293 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 RNU7-40P-201ENST00000516397 64 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 RNU6-453P-201ENST00000516819 85 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 SNORA18.7-201ENST00000516910 131 ntBASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC13Q8IYE1 RNA5SP327-201ENST00000362494 101 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 Y_RNA.66-201ENST00000362862 102 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 Y_RNA.547-201ENST00000384654 119 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 SNORA26-201ENST00000391286 122 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 AL606845.1-201ENST00000404881 255 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 MIR548O-201ENST00000408583 114 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 RNU4-43P-201ENST00000410628 137 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 snoU13.25-201ENST00000458945 104 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 AL133373.1-201ENST00000497098 94 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 RNU7-25P-201ENST00000516544 62 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 AP003716.2-201ENST00000528260 108 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 MIR3192-201ENST00000584920 77 ntBASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC13Q8IYE1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CCDC13Q8IYE1 RNU6-888P-201ENST00000363010 101 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms