Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 AC092991.1-201ENST00000477176 376 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 AC090255.1-201ENST00000495779 349 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU7-25P-201ENST00000516544 62 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU1-40P-201ENST00000516816 164 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 RNU1-97P-201ENST00000516872 164 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 MIR3646-201ENST00000578301 84 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 MIR3129-201ENST00000581095 76 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 AP001485.1-201ENST00000604799 199 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 MIR6895-201ENST00000613497 78 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 AL773524.1-201ENST00000614065 229 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 AC015726.2-201ENST00000620112 122 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 SNORD3E-202ENST00000627253 216 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 AP000553.5-201ENST00000641933 54 ntBASIC1.8□□□□□ -2.12
SFTPA1Q8IWL2 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.420-201ENST00000384043 110 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 MIR548A2-201ENST00000384956 97 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-360P-201ENST00000390944 104 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 Y_RNA.586-201ENST00000391146 98 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 RNA5SP212-201ENST00000391223 107 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 PGBD4P5-201ENST00000445958 426 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 AC079804.2-201ENST00000490376 200 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 AC006441.5-201ENST00000612680 209 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 AC027279.3-201ENST00000625055 122 ntBASIC1.79□□□□□ -2.12
SFTPA1Q8IWL2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 AC010332.2-201ENST00000613083 1904 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-888P-201ENST00000363010 101 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 RNU6-833P-201ENST00000363486 107 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 SNORD24-201ENST00000383884 75 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 MIR518F-201ENST00000384973 87 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 AC244636.1-201ENST00000421152 228 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 MTND4LP9-201ENST00000427694 174 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 AC108729.3-201ENST00000513484 108 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 AC090142.3-201ENST00000519012 385 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.78□□□□□ -2.12
SFTPA1Q8IWL2 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 SNORD38C-201ENST00000384381 69 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.542-201ENST00000384641 111 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.547-201ENST00000384654 119 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 MIR516B2-201ENST00000385190 85 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 MIR660-201ENST00000385235 97 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 RPL23AP6-201ENST00000446637 472 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 SNORA18.4-201ENST00000516440 124 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 AC121758.2-201ENST00000553271 193 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 AL513423.1-201ENST00000621695 132 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
SFTPA1Q8IWL2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 MIR424-201ENST00000362227 98 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-414P-201ENST00000363705 104 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-81P-201ENST00000365608 104 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 MIR17-201ENST00000385012 84 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 AC015922.2-201ENST00000435593 184 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 AF228730.3-201ENST00000436691 102 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-971P-201ENST00000516920 106 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 IGLV3-17-201ENST00000519099 244 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 SUMO2P16-201ENST00000519475 264 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 MIR4299-201ENST00000577899 72 ntBASIC1.76□□□□□ -2.13
SFTPA1Q8IWL2 AC008555.8-201ENST00000623602 2168 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 AC131280.1-202ENST00000624067 4211 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 AL596028.1-201ENST00000326971 197 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.251-201ENST00000364551 99 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 SNORD113-1-201ENST00000365321 69 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 AP1B1P2-201ENST00000416196 106 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 AL365205.2-201ENST00000594586 68 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 snoU13.31-201ENST00000607291 104 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 AC106754.2-201ENST00000623006 233 ntBASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SFTPA1Q8IWL2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-508P-201ENST00000363231 103 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 SNORA40-201ENST00000388090 126 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.584-201ENST00000391090 114 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 SNORD77.3-201ENST00000391113 65 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 RNA5SP127-201ENST00000411051 133 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 RNA5SP247-201ENST00000411181 105 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.686-201ENST00000516548 134 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 AC022254.1-201ENST00000567857 235 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 MIR6840-201ENST00000611937 71 ntBASIC1.74□□□□□ -2.13
SFTPA1Q8IWL2 U8.1-201ENST00000362843 134 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 SNORD115-28-201ENST00000363931 81 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 Y_RNA.294-201ENST00000364916 102 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-959P-201ENST00000384671 107 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 MIR452-201ENST00000385020 85 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 RNU6-1211P-201ENST00000459179 105 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 MIR4781-201ENST00000585250 76 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 AC134878.1-201ENST00000619901 243 ntBASIC1.73□□□□□ -2.13
SFTPA1Q8IWL2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms