Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.323-201ENST00000365157 109 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.362-201ENST00000365518 110 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 SNORD38C-201ENST00000384381 69 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 RNU4-53P-201ENST00000410828 140 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP281-201ENST00000516504 135 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 RNU7-25P-201ENST00000516544 62 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 RNU6-94P-201ENST00000607728 107 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 AC134878.1-201ENST00000619901 243 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 AL513423.1-201ENST00000621695 132 ntBASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.49-201ENST00000362714 112 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 RNU6-690P-201ENST00000365242 106 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 RNU6-424P-201ENST00000384367 105 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 RNU6-360P-201ENST00000390944 104 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 UBL5P3-201ENST00000475112 231 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 RNU6-830P-201ENST00000516353 107 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 RNU6-109P-201ENST00000516364 107 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 RNU6-184P-201ENST00000516514 107 ntBASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.75□□□□□ -1.97
NPAS4Q8IUM7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 RNU6-349P-201ENST00000362402 107 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 RNY4P6-201ENST00000363667 96 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 RNU6-414P-201ENST00000363705 104 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.388-201ENST00000383919 113 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 RNU6-1189P-201ENST00000383958 107 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP344-201ENST00000411081 104 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 AC114811.1-201ENST00000507207 168 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 RNU7-12P-201ENST00000516030 62 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 SNORA40.13-201ENST00000516379 120 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 SNORA31.17-201ENST00000516953 127 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 AC006441.5-201ENST00000612680 209 ntBASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.74□□□□□ -1.97
NPAS4Q8IUM7 AL596211.1-201ENST00000569873 2277 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.37-201ENST00000362606 108 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 RNU6-833P-201ENST00000363486 107 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.410-201ENST00000383992 113 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.547-201ENST00000384654 119 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 MIR590-201ENST00000385008 97 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 SNORA19.1-201ENST00000410656 129 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 RNY4P29-201ENST00000410801 97 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 Z98742.3-201ENST00000418637 326 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 snoU13.26-201ENST00000459452 105 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP168-201ENST00000516642 112 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 SNORD36C-201ENST00000516733 66 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 RNU6-762P-201ENST00000517107 102 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 SUMO2P16-201ENST00000519475 264 ntBASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NPAS4Q8IUM7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP276-201ENST00000362580 94 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 SNORD115-28-201ENST00000363931 81 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 RNU6-268P-201ENST00000364174 107 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 Y_RNA.213-201ENST00000364178 111 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 MIR488-201ENST00000365739 83 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 RNU6-1113P-201ENST00000384348 107 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 RNA5SP425-201ENST00000410336 112 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 PGBD4P5-201ENST00000445958 426 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 MIR5009-201ENST00000578736 100 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 AC021443.1-201ENST00000604478 211 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 AL049779.4-201ENST00000604500 156 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
NPAS4Q8IUM7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
NPAS4Q8IUM7 RNU6-1104P-201ENST00000384723 104 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 MIR452-201ENST00000385020 85 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 U8.16-201ENST00000391279 133 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 SNRPGP14-201ENST00000435400 219 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 RPL23AP6-201ENST00000446637 472 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 RNU7-70P-201ENST00000516941 66 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 IGKV3-31-201ENST00000523109 329 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 AC068339.1-201ENST00000526965 141 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 AC021506.2-201ENST00000612354 169 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NPAS4Q8IUM7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 MIRLET7C-201ENST00000362160 84 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 Y_RNA.298-201ENST00000364960 107 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 Y_RNA.344-201ENST00000365381 112 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 Y_RNA.544-201ENST00000384650 113 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 MIR759-201ENST00000390224 91 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 SNORA26.2-201ENST00000390922 122 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 U8.17-201ENST00000391292 132 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 RNU6-938P-201ENST00000411285 103 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 RNU7-164P-201ENST00000459221 62 ntBASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.7□□□□□ -1.98
NPAS4Q8IUM7 AC234781.5-201ENST00000508429 271 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms